BLASTX nr result

ID: Atractylodes21_contig00054921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054921
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...    97   1e-18
ref|XP_003522482.1| PREDICTED: uncharacterized protein LOC100817...    97   2e-18
gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptas...    97   2e-18
gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptas...    96   2e-18
ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A...    96   4e-18

>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   IKRCLKSATVSVLINGSPTSEFGLQRGVRQGDPLSPFLFLIVAEVLSVVMEEAMDSGIFT 182
           IK C+ +AT SVL+NGSPT EF L RG+ QGDPLSPFLFL+ AE L V+M+  +D+ +F 
Sbjct: 14  IKECITTATASVLVNGSPTDEFPLGRGLLQGDPLSPFLFLLAAEGLHVMMKAMVDASLFR 73

Query: 183 GIKIGR-DKVGVSHLQFADDS 242
           G ++G  ++V VSHLQFADD+
Sbjct: 74  GYRVGSGNEVVVSHLQFADDT 94


>ref|XP_003522482.1| PREDICTED: uncharacterized protein LOC100817327 [Glycine max]
          Length = 498

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/80 (53%), Positives = 64/80 (80%)
 Frame = +3

Query: 3   IKRCLKSATVSVLINGSPTSEFGLQRGVRQGDPLSPFLFLIVAEVLSVVMEEAMDSGIFT 182
           IK CLK A++SVL+NGSPT+EF  QRG+RQGDPL+PFL+ ++AE L+ +M +AM+  ++ 
Sbjct: 91  IKGCLKFASISVLVNGSPTAEFLPQRGLRQGDPLAPFLYNVIAEALNGLMRKAMEENLYK 150

Query: 183 GIKIGRDKVGVSHLQFADDS 242
           G  +G ++V +S LQ+ADD+
Sbjct: 151 GFSVGSNQVNISILQYADDT 170


>gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 320

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   IKRCLKSATVSVLINGSPTSEFGLQRGVRQGDPLSPFLFLIVAEVLSVVMEEAMDSGIFT 182
           IK C+ + T S+L+NG+PT EF L+RG+RQGDPLSPFLFL+ AE L+++M+  +++ IFT
Sbjct: 136 IKECVCTTTTSMLVNGNPTLEFPLERGLRQGDPLSPFLFLLAAEGLNIMMQSMVENNIFT 195

Query: 183 GIKIG-RDKVGVSHLQFADDS 242
           G  +G  D   VSHLQFADD+
Sbjct: 196 GYFVGAHDTTVVSHLQFADDT 216


>gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 469

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   IKRCLKSATVSVLINGSPTSEFGLQRGVRQGDPLSPFLFLIVAEVLSVVMEEAMDSGIFT 182
           IK C+ +AT SVL+NGSP  EF L+RG+RQGD LSPFLFL+ AE   V+M+   D  +F 
Sbjct: 91  IKECIGTATTSVLVNGSPIDEFSLRRGLRQGDRLSPFLFLLAAEGFHVLMKSMTDIDLFH 150

Query: 183 GIKIGR-DKVGVSHLQFADDS 242
           G  +GR D+V VSHLQFADD+
Sbjct: 151 GYTVGRNDQVSVSHLQFADDT 171


>ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 549

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/80 (58%), Positives = 62/80 (77%)
 Frame = +3

Query: 3   IKRCLKSATVSVLINGSPTSEFGLQRGVRQGDPLSPFLFLIVAEVLSVVMEEAMDSGIFT 182
           I+ CLKSA++SVL+NGSPT EF  Q+G+RQGDPLSP LF IVAE LS +M +A++ G + 
Sbjct: 14  IQGCLKSASISVLVNGSPTKEFYPQKGLRQGDPLSPLLFNIVAEGLSGLMTKAIEGGFYK 73

Query: 183 GIKIGRDKVGVSHLQFADDS 242
           G  +G  KV +S LQ+ADD+
Sbjct: 74  GFLVGLKKVEISLLQYADDT 93


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