BLASTX nr result

ID: Atractylodes21_contig00054915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054915
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]   143   2e-32
gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi...   140   1e-31
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   136   2e-30
gb|ACB28472.1| polyprotein [Ananas comosus]                           133   2e-29
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]   130   8e-29

>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
          Length = 672

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/146 (47%), Positives = 99/146 (67%)
 Frame = +1

Query: 1   IQESVAMDGRLQGLIDVLKNDPAYSDKYHLEGGCLFRKGRMVVGDNNELKRDLIKFFHAS 180
           I+ES  +D  LQ +I   + DP+   KY   G  L RKG++VVG N +L+R+++  FH S
Sbjct: 133 IKESWGVDPELQKIIKAKEADPSAYPKYSWRGEELRRKGKLVVGVNEQLRREILNSFHDS 192

Query: 181 SMGGHSGVHATTQRLARVVYWKGMQAQVREIVRGCYVCQQCKYDTSASPGLLQPMEIPER 360
             GGHSGV+ TT+R++ V+YWKG++  VRE VR C+VCQ+ K +     GLLQP+ +PE 
Sbjct: 193 PTGGHSGVYVTTKRISAVIYWKGLRKFVREYVRNCFVCQRFKPENKPYSGLLQPLPVPEG 252

Query: 361 FWSVVSMDFVEGLPKLWGYTTILVVV 438
            ++ ++MDF+EGLPK  G T I VVV
Sbjct: 253 VFTDITMDFIEGLPKSNGKTAIFVVV 278


>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 780

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/146 (45%), Positives = 91/146 (62%)
 Frame = +1

Query: 1   IQESVAMDGRLQGLIDVLKNDPAYSDKYHLEGGCLFRKGRMVVGDNNELKRDLIKFFHAS 180
           IQ     DG +QG+I +L+        Y    G L RK ++VV +N+ +K  ++++ H S
Sbjct: 423 IQAGYVTDGDIQGIITILQQQADSKKHYTWSQGVLRRKNKIVVPNNSGIKDTILRWLHCS 482

Query: 181 SMGGHSGVHATTQRLARVVYWKGMQAQVREIVRGCYVCQQCKYDTSASPGLLQPMEIPER 360
            MGGHSG   T QR+  + YWK M   ++  +R C  CQQCK D +ASPGLLQP+ IP+R
Sbjct: 483 GMGGHSGKEVTHQRVKGLFYWKSMVKDIQAFIRSCGTCQQCKSDNAASPGLLQPLPIPDR 542

Query: 361 FWSVVSMDFVEGLPKLWGYTTILVVV 438
            WS VSMDF++GLP   G T I+VVV
Sbjct: 543 IWSDVSMDFIDGLPLSNGKTVIMVVV 568


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/146 (45%), Positives = 89/146 (60%)
 Frame = +1

Query: 1    IQESVAMDGRLQGLIDVLKNDPAYSDKYHLEGGCLFRKGRMVVGDNNELKRDLIKFFHAS 180
            IQ   A D +LQ +I  L+ DP     +      L RK ++VV  N+ +K  ++ + H S
Sbjct: 1032 IQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWLHGS 1091

Query: 181  SMGGHSGVHATTQRLARVVYWKGMQAQVREIVRGCYVCQQCKYDTSASPGLLQPMEIPER 360
             +GGHSG   T QR+  + YWKGM   ++  +R C  CQQCK D +ASPGLLQP+ IP+ 
Sbjct: 1092 GVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPIPDT 1151

Query: 361  FWSVVSMDFVEGLPKLWGYTTILVVV 438
             WS VSMDF+EGLP   G T I+VVV
Sbjct: 1152 IWSEVSMDFIEGLPVSGGKTVIMVVV 1177


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/146 (47%), Positives = 95/146 (65%)
 Frame = +1

Query: 1    IQESVAMDGRLQGLIDVLKNDPAYSDKYHLEGGCLFRKGRMVVGDNNELKRDLIKFFHAS 180
            I+ S  +D +L+ +I   ++D     +Y      L RKG++VVG +  LK  LI  FHAS
Sbjct: 656  IKWSWNVDDKLKKIIQQKQSDINSWPRYTWVQDQLRRKGKLVVGSDPGLKLQLIHNFHAS 715

Query: 181  SMGGHSGVHATTQRLARVVYWKGMQAQVREIVRGCYVCQQCKYDTSASPGLLQPMEIPER 360
            S+GGHSG+ ATT++L    YWKG++  V + VR C VCQQ KY+T+A  GLLQP+ IPE 
Sbjct: 716  SIGGHSGMEATTRKLKGQFYWKGLRRDVEQFVRECSVCQQNKYETTAPAGLLQPLPIPEG 775

Query: 361  FWSVVSMDFVEGLPKLWGYTTILVVV 438
             W+ +SMDF+EGLP   G   I+VVV
Sbjct: 776  IWTEISMDFIEGLPNSQGKEVIMVVV 801


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score =  130 bits (328), Expect = 8e-29
 Identities = 64/126 (50%), Positives = 87/126 (69%)
 Frame = +1

Query: 61   DPAYSDKYHLEGGCLFRKGRMVVGDNNELKRDLIKFFHASSMGGHSGVHATTQRLARVVY 240
            DP+   KY   G  L RKG++VVG N +L+R+++  FH S  GGHSGV+ TT+R++ VVY
Sbjct: 1015 DPSAYPKYSWRGEELRRKGKLVVGVNEQLRREILNSFHDSPTGGHSGVYVTTKRISVVVY 1074

Query: 241  WKGMQAQVREIVRGCYVCQQCKYDTSASPGLLQPMEIPERFWSVVSMDFVEGLPKLWGYT 420
            WKG++  VRE VR C VCQ+ K +     GLLQP+ +PE  ++ ++MDF+EGLPK  G T
Sbjct: 1075 WKGLRKFVREYVRNCSVCQRFKPENKPYSGLLQPLPVPEGVFTDITMDFIEGLPKSNGKT 1134

Query: 421  TILVVV 438
             I VVV
Sbjct: 1135 EIFVVV 1140


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