BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054913
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   139   3e-31
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   137   7e-31
gb|AAA33448.1| reverse transcriptase, partial [Zea mays]              134   1e-29
pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize tr...   134   1e-29
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ...   128   4e-28

>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/106 (63%), Positives = 74/106 (69%)
 Frame = +3

Query: 3    EALHTAVYLHNILPTKRLNFYTPTFALYLRHPEYKHLRVFGRACYPNTSATQPHKLHARS 182
            EALHTA +L N  PTK L  +TP FALY  HP Y HLRVFG  CYPN SAT PHKL  RS
Sbjct: 800  EALHTATHLINRHPTKMLQHHTPFFALYGVHPSYAHLRVFGCKCYPNLSATAPHKLSPRS 859

Query: 183  IRCIFLGYPPDFRGYRCFDPTTGKVHISRHVTFDENVFPYTIPQNP 320
              CIFLGYP   +GYRC DP+T +V ISRHV FDE+ FPY    +P
Sbjct: 860  TMCIFLGYPLHHKGYRCLDPSTNRVIISRHVVFDEHSFPYANISSP 905


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/101 (64%), Positives = 74/101 (73%)
 Frame = +3

Query: 3    EALHTAVYLHNILPTKRLNFYTPTFALYLRHPEYKHLRVFGRACYPNTSATQPHKLHARS 182
            EALHTA +L N  PTK L+ +TP FALY  HP Y HLRVFG  CYPN SAT PHKL  RS
Sbjct: 882  EALHTATHLINRHPTKTLDRHTPHFALYGTHPSYSHLRVFGCKCYPNLSATTPHKLAPRS 941

Query: 183  IRCIFLGYPPDFRGYRCFDPTTGKVHISRHVTFDENVFPYT 305
              C+FLGYP   +GYRCFDP + +V ISRHV FDE+ FP+T
Sbjct: 942  TMCVFLGYPLYHKGYRCFDPLSNRVIISRHVVFDEHSFPFT 982


>gb|AAA33448.1| reverse transcriptase, partial [Zea mays]
          Length = 700

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/99 (65%), Positives = 75/99 (75%)
 Frame = +3

Query: 3   EALHTAVYLHNILPTKRLNFYTPTFALYLRHPEYKHLRVFGRACYPNTSATQPHKLHARS 182
           EALHTA +L N LP+K ++  TP FALY   P Y HLRVFG ACYPNTSAT PHKL  RS
Sbjct: 63  EALHTATHLLNRLPSKAVSHPTPHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRS 122

Query: 183 IRCIFLGYPPDFRGYRCFDPTTGKVHISRHVTFDENVFP 299
            RC+FLGY PD +GYRC D T+ ++ ISRHV FDE+VFP
Sbjct: 123 TRCLFLGYSPDHKGYRCLDLTSHRI-ISRHVVFDEDVFP 160


>pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon
           (fragment)
          Length = 699

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/99 (65%), Positives = 75/99 (75%)
 Frame = +3

Query: 3   EALHTAVYLHNILPTKRLNFYTPTFALYLRHPEYKHLRVFGRACYPNTSATQPHKLHARS 182
           EALHTA +L N LP+K ++  TP FALY   P Y HLRVFG ACYPNTSAT PHKL  RS
Sbjct: 63  EALHTATHLLNRLPSKAVSHPTPHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRS 122

Query: 183 IRCIFLGYPPDFRGYRCFDPTTGKVHISRHVTFDENVFP 299
            RC+FLGY PD +GYRC D T+ ++ ISRHV FDE+VFP
Sbjct: 123 TRCLFLGYSPDHKGYRCLDLTSHRI-ISRHVVFDEDVFP 160


>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
            gi|241947124|gb|EES20269.1| hypothetical protein
            SORBIDRAFT_0139s002040 [Sorghum bicolor]
          Length = 1822

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/106 (56%), Positives = 74/106 (69%)
 Frame = +3

Query: 3    EALHTAVYLHNILPTKRLNFYTPTFALYLRHPEYKHLRVFGRACYPNTSATQPHKLHARS 182
            E+LHT+ YL N LP+      TP  AL+   P Y HLRVFG ACYPNT+AT PHKL  RS
Sbjct: 1008 ESLHTSTYLLNRLPSAACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLAPRS 1067

Query: 183  IRCIFLGYPPDFRGYRCFDPTTGKVHISRHVTFDENVFPYTIPQNP 320
              C+FLGY PD +GYRC+D T+ +V ISRHV FDE++FP++    P
Sbjct: 1068 TLCVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDESIFPFSTTTTP 1113