BLASTX nr result

ID: Atractylodes21_contig00054906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054906
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   170   1e-40
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   164   9e-39
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   155   3e-36
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   151   6e-35
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   146   2e-33

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  170 bits (431), Expect = 1e-40
 Identities = 72/95 (75%), Positives = 88/95 (92%)
 Frame = -1

Query: 287  HPFTAQSVAVIFIKEIVRLHGFPSTTVSDRDKVFMSIFWRELFRLHGTTLLRSTAYHPQT 108
            HPFTA  VA +F+KE+VRLHGFPS+ VSDRD++F+S+FW+ELFRLHGTTL RS+AYHPQT
Sbjct: 1280 HPFTALMVADLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQT 1339

Query: 107  DGQTEVVNKTLETYLRCFIQGNPRTWAQWLPWAEF 3
            DGQTE+VN+ LETYLRCF+ G+PR+WA+WLPWAEF
Sbjct: 1340 DGQTEIVNRALETYLRCFVGGHPRSWAKWLPWAEF 1374


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  164 bits (414), Expect = 9e-39
 Identities = 72/95 (75%), Positives = 83/95 (87%)
 Frame = -1

Query: 287  HPFTAQSVAVIFIKEIVRLHGFPSTTVSDRDKVFMSIFWRELFRLHGTTLLRSTAYHPQT 108
            HPFTA +VA +FIKEIV+LHGFPST VSDRDKVFMS+FW+ELF+L GT L RSTAYHPQ+
Sbjct: 1213 HPFTAPTVAAVFIKEIVKLHGFPSTIVSDRDKVFMSLFWKELFKLQGTLLHRSTAYHPQS 1272

Query: 107  DGQTEVVNKTLETYLRCFIQGNPRTWAQWLPWAEF 3
            DGQTEVVNK+LE YLRCF  G P+ WAQW+ WAE+
Sbjct: 1273 DGQTEVVNKSLEAYLRCFCNGRPKAWAQWISWAEY 1307


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  155 bits (392), Expect = 3e-36
 Identities = 70/95 (73%), Positives = 81/95 (85%)
 Frame = -1

Query: 287  HPFTAQSVAVIFIKEIVRLHGFPSTTVSDRDKVFMSIFWRELFRLHGTTLLRSTAYHPQT 108
            HPF+A +VA +FIKE+V+LHGFP+T VSDRDKVFMSIFW+ELF+L  T L RSTAYHPQ 
Sbjct: 1049 HPFSAATVAQVFIKEVVKLHGFPTTIVSDRDKVFMSIFWKELFKLQRTLLHRSTAYHPQL 1108

Query: 107  DGQTEVVNKTLETYLRCFIQGNPRTWAQWLPWAEF 3
            DGQTEVVNK++E  LRCFIQG P TWA WL WAE+
Sbjct: 1109 DGQTEVVNKSVEASLRCFIQGKPHTWANWLCWAEY 1143


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  151 bits (381), Expect = 6e-35
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = -1

Query: 287  HPFTAQSVAVIFIKEIVRLHGFPSTTVSDRDKVFMSIFWRELFRLHGTTLLRSTAYHPQT 108
            HPFTA++VA IF+KEIVRLHGFP + VSDRDKVF+S FW+ +F+L GT L RSTAYHPQT
Sbjct: 2128 HPFTAKTVAEIFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTAYHPQT 2187

Query: 107  DGQTEVVNKTLETYLRCFIQGNPRTWAQWLPWAEF 3
            DGQTEVVN+++ETYLRCF    P+ WA+WL WAE+
Sbjct: 2188 DGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEY 2222


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  146 bits (369), Expect = 2e-33
 Identities = 63/95 (66%), Positives = 79/95 (83%)
 Frame = -1

Query: 287  HPFTAQSVAVIFIKEIVRLHGFPSTTVSDRDKVFMSIFWRELFRLHGTTLLRSTAYHPQT 108
            HPFTA++V   FI+++V+LHGFP+T VSDRD++F+S FW ELF+L GT L +STAYHPQT
Sbjct: 1306 HPFTAKTVVEAFIRDVVKLHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQT 1365

Query: 107  DGQTEVVNKTLETYLRCFIQGNPRTWAQWLPWAEF 3
            DGQTEVVN+ LE+YLRCF    P +W QWLPWAE+
Sbjct: 1366 DGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEY 1400


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