BLASTX nr result

ID: Atractylodes21_contig00054890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054890
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
emb|CBI30729.3| unnamed protein product [Vitis vinifera]              171   6e-41
emb|CBI30147.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ...   132   2e-29

>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/109 (74%), Positives = 96/109 (88%)
 Frame = +3

Query: 3   FYELLSDGFKPNEVTFVGVLSACSRSGLLDEGHEMFELMVHAHGIKPKIEHYGCMVDLLG 182
           F E+L +GFKPNEVTFV VLSACSR+GLLDEG EMF LMVH HGI+P IEHYGCMVDLLG
Sbjct: 360 FSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLG 419

Query: 183 RFGLLDEAEKLAREVPFKESQVVWESLLGACRSHNDVEMAEQVTRKLLE 329
           R GLL+EAE+L +++P KE+ VVWESLLGACR+H +VE+AE+V +KLLE
Sbjct: 420 RVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLE 468


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/109 (74%), Positives = 96/109 (88%)
 Frame = +3

Query: 3   FYELLSDGFKPNEVTFVGVLSACSRSGLLDEGHEMFELMVHAHGIKPKIEHYGCMVDLLG 182
           F E+L +GFKPNEVTFV VLSACSR+GLLDEG EMF LMVH HGI+P IEHYGCMVDLLG
Sbjct: 330 FSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLG 389

Query: 183 RFGLLDEAEKLAREVPFKESQVVWESLLGACRSHNDVEMAEQVTRKLLE 329
           R GLL+EAE+L +++P KE+ VVWESLLGACR+H +VE+AE+V +KLLE
Sbjct: 390 RVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLE 438


>emb|CBI30147.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/109 (57%), Positives = 87/109 (79%)
 Frame = +3

Query: 3   FYELLSDGFKPNEVTFVGVLSACSRSGLLDEGHEMFELMVHAHGIKPKIEHYGCMVDLLG 182
           F EL+S G KP+EVTFVGVL AC  SGL++EG ++FE M +A+GIKP++EHYGCMVDLLG
Sbjct: 224 FRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLG 283

Query: 183 RFGLLDEAEKLAREVPFKESQVVWESLLGACRSHNDVEMAEQVTRKLLE 329
           R+G L+EA  L +++PF+ + V+W +LL ACR+H +V++ E   +KLLE
Sbjct: 284 RYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLE 332


>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/109 (57%), Positives = 87/109 (79%)
 Frame = +3

Query: 3   FYELLSDGFKPNEVTFVGVLSACSRSGLLDEGHEMFELMVHAHGIKPKIEHYGCMVDLLG 182
           F EL+S G KP+EVTFVGVL AC  SGL++EG ++FE M +A+GIKP++EHYGCMVDLLG
Sbjct: 439 FRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLG 498

Query: 183 RFGLLDEAEKLAREVPFKESQVVWESLLGACRSHNDVEMAEQVTRKLLE 329
           R+G L+EA  L +++PF+ + V+W +LL ACR+H +V++ E   +KLLE
Sbjct: 499 RYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLE 547


>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313808|gb|EFH44231.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 535

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/109 (55%), Positives = 82/109 (75%)
 Frame = +3

Query: 3   FYELLSDGFKPNEVTFVGVLSACSRSGLLDEGHEMFELMVHAHGIKPKIEHYGCMVDLLG 182
           F E++ +GFKPN +TF+GVLSAC+  GLLD+  ++FE+M   +GI+P IEHYGCMVDLLG
Sbjct: 363 FSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLG 422

Query: 183 RFGLLDEAEKLAREVPFKESQVVWESLLGACRSHNDVEMAEQVTRKLLE 329
           R G  +EAE+L  EVP  E+ ++ ESLLGAC+    +E AE++  +LLE
Sbjct: 423 RMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLE 471


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