BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054776
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACE86397.1| putative retroelement protein [Sorghum bicolor]         42   1e-06
ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [S...    39   1e-06
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]               39   2e-06

>gb|ACE86397.1| putative retroelement protein [Sorghum bicolor]
          Length = 732

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 13/48 (27%)
 Frame = -3

Query: 109 NRPKQWRKWLCWADY*YNTSYHF-------------*PPMLLKYKEAA 5
           +RP+ W  WL WA+Y YNTSYH               PP+LL ++E A
Sbjct: 534 DRPRSWVDWLPWAEYCYNTSYHMALCVTPFEIVYGRPPPLLLPHQEGA 581



 Score = 35.0 bits (79), Expect(2) = 1e-06
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -1

Query: 213 FQKSIIMGRDKIF---IRKELFKLLGTK*RYSAAYHPQTDPNS 94
           F  SI+  RD +F   + ++LF+L   K R S A+HPQ D  S
Sbjct: 475 FPTSIVSDRDPVFTSHLWRDLFRLTSVKQRLSTAFHPQMDGQS 517


>ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
            gi|241943812|gb|EES16957.1| hypothetical protein
            SORBIDRAFT_08g009520 [Sorghum bicolor]
          Length = 1595

 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -1

Query: 213  FQKSIIMGRDKIF---IRKELFKLLGTK*RYSAAYHPQTDPNS 94
            F  SI+  RD +F   + ++LFK+ G   R S A+HPQTD  S
Sbjct: 1285 FPSSIVSDRDPVFTGHVWRDLFKMAGVSLRMSTAFHPQTDGQS 1327



 Score = 38.5 bits (88), Expect(2) = 1e-06
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 109  NRPKQWRKWLCWADY*YNTSYH 44
            +RP+ W  WL WA+Y YNTS+H
Sbjct: 1344 DRPRAWVDWLSWAEYCYNTSFH 1365


>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 109  NRPKQWRKWLCWADY*YNTSYH 44
            +RP+ W  WL WA+Y YNTS+H
Sbjct: 1612 DRPRAWVDWLSWAEYCYNTSFH 1633



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -1

Query: 213  FQKSIIMGRDKIF---IRKELFKLLGTK*RYSAAYHPQTDPNS 94
            F  SI+  RD +F   + ++LFK  G   R S A+HPQTD  S
Sbjct: 1553 FPSSIVSDRDPVFTGHVWRDLFKCAGVSLRMSTAFHPQTDGQS 1595