BLASTX nr result

ID: Atractylodes21_contig00054772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054772
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]    60   2e-07
ref|XP_003630835.1| B3 domain-containing protein [Medicago trunc...    58   9e-07
ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854...    56   3e-06
emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]    56   3e-06
ref|XP_003592583.1| 60S ribosomal protein L7 [Medicago truncatul...    55   8e-06

>emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]
          Length = 617

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
 Frame = +1

Query: 10  AVERAQANFKCHKPFFMAYMYQSYVTKKAGLLIPFEFRSKFWSDSKKHIKCSLQLVNDNG 189
           A+ERA++ FK  KPFF+  M  SYV  K  L +P  F  + +   K+    ++  V+D  
Sbjct: 159 ALERAKS-FKFEKPFFIITMRPSYVGSKKSLTVPLSFVKRHF---KRDNNNTILSVSDG- 213

Query: 190 RRRKTWKVFIY---NKLLGYGDWMMFVKDNGITVGDVCAFQLIR 312
              +TW V      N +     W  FV+DN + VGDVCAF+L++
Sbjct: 214 ---RTWSVKYIKRKNNVQFSSGWTKFVRDNSLEVGDVCAFELVK 254


>ref|XP_003630835.1| B3 domain-containing protein [Medicago truncatula]
           gi|355524857|gb|AET05311.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 498

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/104 (34%), Positives = 51/104 (49%)
 Frame = +1

Query: 31  NFKCHKPFFMAYMYQSYVTKKAGLLIPFEFRSKFWSDSKKHIKCSLQLVNDNGRRRKTWK 210
           N+K + PFF   M  SY  K   + IP +F  K+  + +  I      V DNGR   TW 
Sbjct: 235 NYKTNNPFFTVVMTYSYANKY--MYIPVDFEQKYMKEKQSVIVLQ---VLDNGR---TWN 286

Query: 211 VFIYNKLLGYGDWMMFVKDNGITVGDVCAFQLIRKHPIVLGVTI 342
           V  + + +  G W  F  DN + VGDVC F++I+ +     V I
Sbjct: 287 VKHWGRHVSTG-WKKFAFDNNLKVGDVCLFEMIKSNAYAFKVLI 329


>ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854873 [Vitis vinifera]
          Length = 1020

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
 Frame = +1

Query: 10   AVERAQANFKCHKPFFMAYMYQSYVTKKAGLLIPFEF-RSKFWSDSKKHIKCSLQLVNDN 186
            A+ RA+A FK   PFF+  M  SY+    GL IP  F +  F +D+KK       L   +
Sbjct: 900  ALGRAKA-FKFENPFFIVTMRPSYIGSWYGLSIPLSFVKRHFKTDNKK-----TTLSVSD 953

Query: 187  GRRRKTWKVFIY----NKLLGYGDWMMFVKDNGITVGDVCAFQLIR 312
            GR   TW V       +K+     W  F +DN + VGDVCAF+LI+
Sbjct: 954  GR---TWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVCAFELIK 996


>emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]
          Length = 352

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
 Frame = +1

Query: 10  AVERAQANFKCHKPFFMAYMYQSYVTKKAGLLIPFEFRSKFWSDSKKHIKCSLQLVNDNG 189
           A+ RA+A FK   PFF+  M  SYV    GL IP  F        K+H K        + 
Sbjct: 232 ALGRAKA-FKFENPFFIVTMRPSYVGSWYGLSIPLSF-------VKRHFKTDXNKTTLSV 283

Query: 190 RRRKTWKVFIY----NKLLGYGDWMMFVKDNGITVGDVCAFQLIR 312
              +TW V       +K+     W  F +DN + VGDVCAF+LI+
Sbjct: 284 SDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVCAFELIK 328


>ref|XP_003592583.1| 60S ribosomal protein L7 [Medicago truncatula]
           gi|355481631|gb|AES62834.1| 60S ribosomal protein L7
           [Medicago truncatula]
          Length = 608

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/104 (31%), Positives = 53/104 (50%)
 Frame = +1

Query: 31  NFKCHKPFFMAYMYQSYVTKKAGLLIPFEFRSKFWSDSKKHIKCSLQLVNDNGRRRKTWK 210
           N++ + PFF A M  SYV +   + +P  F  K+  + +  I  +LQ+++D     +TW 
Sbjct: 215 NYESNNPFFTAIMTYSYVNQY--MHVPLNFEQKYLKEQQSEI--ALQVLDDE----RTWI 266

Query: 211 VFIYNKLLGYGDWMMFVKDNGITVGDVCAFQLIRKHPIVLGVTI 342
           V    + +  G W  FV DN + +GDVC F++I        V I
Sbjct: 267 VKYCLRKMSNG-WKTFVSDNNLKLGDVCLFEMINSKSYAFKVLI 309


Top