BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054766
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    92   3e-17
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...    91   8e-17
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...    91   1e-16
gb|AAD17357.1| contains similarity to retrovirus-related polypro...    89   3e-16
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    89   4e-16

>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/79 (51%), Positives = 57/79 (72%)
 Frame = -1

Query: 288  VEIHCDNEGAIAHAKEPKSHQRSKXXXXXXXXXHEIVNRGDVKIFKVRSEDNPTDPFTKP 109
            ++++CDN GAIA AKEP+SHQ+SK          E+V+RGDVKI K+ ++ N  DP TKP
Sbjct: 1234 MDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVADPLTKP 1293

Query: 108  TSQNKHDAHTSSIGLRFYN 52
             +Q KH+AHT +IG+R+ N
Sbjct: 1294 LTQPKHEAHTRAIGIRYLN 1312


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/77 (53%), Positives = 56/77 (72%)
 Frame = -1

Query: 288  VEIHCDNEGAIAHAKEPKSHQRSKXXXXXXXXXHEIVNRGDVKIFKVRSEDNPTDPFTKP 109
            ++++CDN GAIA AKEPKSHQ+SK          EI++RGDVKI +V ++ N  D FTKP
Sbjct: 885  IDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKP 944

Query: 108  TSQNKHDAHTSSIGLRF 58
              Q KH++HT++IG+RF
Sbjct: 945  LPQPKHESHTTAIGIRF 961


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/77 (53%), Positives = 56/77 (72%)
 Frame = -1

Query: 288  VEIHCDNEGAIAHAKEPKSHQRSKXXXXXXXXXHEIVNRGDVKIFKVRSEDNPTDPFTKP 109
            ++++CDN GAIA AKEP+SHQ+SK          E+V+RGDVKI KV ++ N  DP TKP
Sbjct: 818  MDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPLTKP 877

Query: 108  TSQNKHDAHTSSIGLRF 58
             +Q KH+AHT +IG+R+
Sbjct: 878  LTQPKHEAHTRAIGIRY 894


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/77 (51%), Positives = 55/77 (71%)
 Frame = -1

Query: 288 VEIHCDNEGAIAHAKEPKSHQRSKXXXXXXXXXHEIVNRGDVKIFKVRSEDNPTDPFTKP 109
           ++++CDN GAIA  KE +SHQ+SK          EI++RGDVKI +V ++ N TDPFTKP
Sbjct: 690 IDLYCDNNGAIAQTKERRSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVTDPFTKP 749

Query: 108 TSQNKHDAHTSSIGLRF 58
             Q KH++HT+ IG+RF
Sbjct: 750 LPQPKHESHTTVIGIRF 766


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = -1

Query: 288  VEIHCDNEGAIAHAKEPKSHQRSKXXXXXXXXXHEIVNRGDVKIFKVRSEDNPTDPFTKP 109
            ++++CDN GAIA AKEP+SHQ+SK          EIV RGDVKI K+ ++ N  DP TKP
Sbjct: 1105 MDLYCDNSGAIAQAKEPRSHQKSKHILRQYHLIREIVGRGDVKICKIHTDLNVADPLTKP 1164

Query: 108  TSQNKHDAHTSSIGLRF 58
              Q KH+AHT ++G+R+
Sbjct: 1165 LPQPKHEAHTRAMGIRY 1181