BLASTX nr result

ID: Atractylodes21_contig00054726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054726
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   129   2e-28
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   121   5e-26
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   113   2e-23
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    73   3e-11
gb|AAK71547.1|AC087852_7 hypothetical protein [Oryza sativa Japo...    60   1e-07

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  129 bits (325), Expect = 2e-28
 Identities = 71/139 (51%), Positives = 89/139 (64%), Gaps = 7/139 (5%)
 Frame = +3

Query: 3   KLKRALIERYGRRQSTNPFEELKDLTQSGTVEEYITEFEYVSSQVGRLPETQYLGYFIGG 182
           KLKRALI RYG R+  NPFEEL  + Q G+VEE++  FE +SSQVGRLPE QYLGYF+ G
Sbjct: 118 KLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSG 177

Query: 183 L*PDLRLRVRTFNPSNRIQAMKIARDIEAELK--GVNTSRPDSRSSQNWRGGKNGAISFF 356
           L P +R RVRT NP NR+Q M+IA+D+E ELK    +  R DS+     R G+N     F
Sbjct: 178 LKPQIRRRVRTLNPLNRMQMMRIAKDVEEELKEEDEDGERSDSKKGVQDRMGRNNWAGSF 237

Query: 357 NPT-----PLQAIKAPGSG 398
             +     P   I++P  G
Sbjct: 238 QKSRSGLNPRDPIRSPNLG 256


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/91 (64%), Positives = 71/91 (78%)
 Frame = +3

Query: 6   LKRALIERYGRRQSTNPFEELKDLTQSGTVEEYITEFEYVSSQVGRLPETQYLGYFIGGL 185
           LKRALI RYG R+  NPFEEL  L Q G+VEE++  FE +SSQVGRLPE QYLGYF+ GL
Sbjct: 136 LKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGL 195

Query: 186 *PDLRLRVRTFNPSNRIQAMKIARDIEAELK 278
            P +R RVRT NP NR++ M+IA+D+E ELK
Sbjct: 196 KPQIRRRVRTLNPRNRMEMMRIAKDVEDELK 226


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/91 (61%), Positives = 69/91 (75%)
 Frame = +3

Query: 3    KLKRALIERYGRRQSTNPFEELKDLTQSGTVEEYITEFEYVSSQVGRLPETQYLGYFIGG 182
            KLK+ALI RY  R+  NPFEEL  L Q G+VEE++  FE +SSQVGRLPE QYLGYF+ G
Sbjct: 808  KLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSG 867

Query: 183  L*PDLRLRVRTFNPSNRIQAMKIARDIEAEL 275
            L   +R RVRT NP+ R+Q M+IA+D+E EL
Sbjct: 868  LKAHIRRRVRTLNPTTRMQMMRIAKDVEDEL 898


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/70 (51%), Positives = 48/70 (68%)
 Frame = +3

Query: 6   LKRALIERYGRRQSTNPFEELKDLTQSGTVEEYITEFEYVSSQVGRLPETQYLGYFIGGL 185
           LK AL+ERYG     N FE+L  L Q GT+EEYI +FE + +Q+ +LP  QYLGYF+ GL
Sbjct: 146 LKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGL 205

Query: 186 *PDLRLRVRT 215
              +R +VR+
Sbjct: 206 KDKIRGKVRS 215


>gb|AAK71547.1|AC087852_7 hypothetical protein [Oryza sativa Japonica Group]
           gi|108711057|gb|ABF98852.1| retrotransposon protein,
           putative, unclassified, expressed [Oryza sativa Japonica
           Group] gi|215701155|dbj|BAG92579.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 281

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/88 (36%), Positives = 49/88 (55%)
 Frame = +3

Query: 3   KLKRALIERYGRRQSTNPFEELKDLTQSGTVEEYITEFEYVSSQVGRLPETQYLGYFIGG 182
           + +  L+ RYG    + P  EL D  ++ TVE+Y   F+ +  + GRL + Q +  F GG
Sbjct: 125 RFRELLVLRYGPPLRSAPLFELADCRRTTTVEDYQDHFQALLPRAGRLTKAQRVQLFTGG 184

Query: 183 L*PDLRLRVRTFNPSNRIQAMKIARDIE 266
           L P L L+V+  NP + + AM +AR  E
Sbjct: 185 LLPPLSLKVQMQNPQSLVTAMSLARQFE 212


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