BLASTX nr result

ID: Atractylodes21_contig00054718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054718
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    72   4e-11
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    70   2e-10
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    67   2e-09
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    62   6e-08
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    60   1e-07

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/81 (44%), Positives = 49/81 (60%)
 Frame = -3

Query: 243 GSTRKLTEDELRDKRARGLCFRCDEKYKVGHQCKKKELAVLLVXXXXXXXXXXXXXXXXX 64
           G  R+LTE EL++KRA+GLCF+CDEK+ VGHQC++KEL+VL +                 
Sbjct: 398 GEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEA 457

Query: 63  XXXEIHIQGAELSLNSVVGLT 1
                     E+SLNSV+GL+
Sbjct: 458 PPSPTEEIPPEVSLNSVIGLS 478


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = -3

Query: 258 VKKTLGSTRKLTEDELRDKRARGLCFRCDEKYKVGHQCKKKELAVLL---VXXXXXXXXX 88
           + K  G  R+L+E EL+ KR  GLCFRCDEK+ +GH+CKKKEL++LL             
Sbjct: 327 IAKPFGEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLM 386

Query: 87  XXXXXXXXXXXEIHIQGAELSLNSVVGLT 1
                      ++ I   E+SLNSV+G++
Sbjct: 387 ENIQPAHPDDSQLEIHSPEISLNSVMGIS 415


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = -3

Query: 234 RKLTEDELRDKRARGLCFRCDEKYKVGHQCKKKELAVLLVXXXXXXXXXXXXXXXXXXXX 55
           ++LTE EL+ +R +G+CF+CDEK+ +GH+C KKEL VLLV                    
Sbjct: 179 KRLTESELQARREKGICFKCDEKFSLGHRC-KKELRVLLVHEDEREEDNQFDERATMEPS 237

Query: 54  EIHIQGA-ELSLNSVVGLT 1
            I ++ A ELSLNSVVGLT
Sbjct: 238 LIELKDAMELSLNSVVGLT 256


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -3

Query: 258 VKKTLGSTRKLTEDELRDKRARGLCFRCDEKYKVGHQCKKKELAVLL 118
           + +  G  R+L+E EL+ KR RGLCFRCD+K+ VGH+C KKEL+VLL
Sbjct: 284 IARPYGEIRRLSEKELQHKRERGLCFRCDDKWSVGHRC-KKELSVLL 329


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -3

Query: 234  RKLTEDELRDKRARGLCFRCDEKYKVGHQCKKKELAVLLVXXXXXXXXXXXXXXXXXXXX 55
            ++LTE EL+ +R +GL F+C+EK+  GH+C KKEL VLLV                    
Sbjct: 977  KRLTESELQARREKGLWFKCEEKFSPGHRC-KKELRVLLVHEDEEEDDNQFDDRATEEPA 1035

Query: 54   EIHIQGA-ELSLNSVVGLT 1
             I ++ A ELSLNSVVGLT
Sbjct: 1036 LIELKDAVELSLNSVVGLT 1054


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