BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054637
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19924.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...   161   4e-38
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35

>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  166 bits (420), Expect = 2e-39
 Identities = 82/116 (70%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
 Frame = +3

Query: 75  SMGADVKTLTNK-ILTHLKLNSLSKAVSTLFQSPVPFDFSLYASLFSLCASRRAIVETRK 251
           ++  D K LT   +LTHL    L KAVS LF SPVPF FSLYA LF +C+S  AIVE RK
Sbjct: 22  ALPTDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPFSLYARLFQICSSNLAIVEARK 81

Query: 252 VESHLLTFNLTPPIFLLNRAIEAYGKCGCLDDARELFDEMPQRDGGSWNALISAYA 419
           VESHL+TF+  PPIFLLNRAIE YGKC CLDDARELF+EMPQRDGGSWNA+I+AYA
Sbjct: 82  VESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYA 137


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score =  166 bits (420), Expect = 2e-39
 Identities = 82/116 (70%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
 Frame = +3

Query: 75  SMGADVKTLTNK-ILTHLKLNSLSKAVSTLFQSPVPFDFSLYASLFSLCASRRAIVETRK 251
           ++  D K LT   +LTHL    L KAVS LF SPVPF FSLYA LF +C+S  AIVE RK
Sbjct: 22  ALPTDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPFSLYARLFQICSSNLAIVEARK 81

Query: 252 VESHLLTFNLTPPIFLLNRAIEAYGKCGCLDDARELFDEMPQRDGGSWNALISAYA 419
           VESHL+TF+  PPIFLLNRAIE YGKC CLDDARELF+EMPQRDGGSWNA+I+AYA
Sbjct: 82  VESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYA 137


>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score =  161 bits (408), Expect = 4e-38
 Identities = 79/108 (73%), Positives = 86/108 (79%)
 Frame = +3

Query: 93  KTLTNKILTHLKLNSLSKAVSTLFQSPVPFDFSLYASLFSLCASRRAIVETRKVESHLLT 272
           K LTN I+ HLK N L KAVS LF S     +SLYASLF LC+S  +IVE RK+ESHL+T
Sbjct: 26  KALTNTIINHLKANRLQKAVSILFASNSSVPYSLYASLFQLCSSTLSIVEARKIESHLIT 85

Query: 273 FNLTPPIFLLNRAIEAYGKCGCLDDARELFDEMPQRDGGSWNALISAY 416
           FN TPPIFLLNRAIE YGKC CL DARELFDEMPQRDGGSWNA+I AY
Sbjct: 86  FNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQRDGGSWNAIIKAY 133


>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
           gi|449521874|ref|XP_004167954.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
          Length = 697

 Score =  160 bits (405), Expect = 1e-37
 Identities = 84/133 (63%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
 Frame = +3

Query: 21  VIAGTCLICVAGRRNLVS-SMGADVKTLTNKILTHLKLNSLSKAVSTLFQSPVPFDFSLY 197
           V A + L  +  R+NL + S   D    T+ IL +L+   L KAV  LF SP PF  +LY
Sbjct: 3   VSAASILNRLLSRKNLTARSEFTDANAATSTILRYLEEGRLGKAVLILFNSPFPFPHTLY 62

Query: 198 ASLFSLCASRRAIVETRKVESHLLTFNLTPPIFLLNRAIEAYGKCGCLDDARELFDEMPQ 377
             LF LC+S RA+VE RKVESHL TF  TPPIFLLNRAIEAYGKCGCL DARELFDEMPQ
Sbjct: 63  TRLFQLCSSTRALVEARKVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEMPQ 122

Query: 378 RDGGSWNALISAY 416
           RDGGSWNA+I+AY
Sbjct: 123 RDGGSWNAMITAY 135



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/73 (31%), Positives = 41/73 (56%)
 Frame = +3

Query: 198 ASLFSLCASRRAIVETRKVESHLLTFNLTPPIFLLNRAIEAYGKCGCLDDARELFDEMPQ 377
           AS+   C S  A+  +R++  H++       + L +  ++ YGKC  ++DAR +FDE+  
Sbjct: 164 ASILRSCGSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQN 223

Query: 378 RDGGSWNALISAY 416
           R+  SWN ++  Y
Sbjct: 224 RNDVSWNVIVRRY 236


>ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Glycine max]
          Length = 698

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/105 (71%), Positives = 82/105 (78%)
 Frame = +3

Query: 105 NKILTHLKLNSLSKAVSTLFQSPVPFDFSLYASLFSLCASRRAIVETRKVESHLLTFNLT 284
           N ILT+LK   + KA S LF  P PF FSLYA  F LC+S RA+VE RKVESHLLTF+  
Sbjct: 35  NTILTYLKAGRIRKATSILFAFPKPFPFSLYALFFRLCSSHRAVVEARKVESHLLTFSPN 94

Query: 285 PPIFLLNRAIEAYGKCGCLDDARELFDEMPQRDGGSWNALISAYA 419
           PP FLLNRAIEAY KC CL DARELFDEMPQ DGGSWNALI+AY+
Sbjct: 95  PPTFLLNRAIEAYAKCHCLRDARELFDEMPQPDGGSWNALITAYS 139



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/74 (29%), Positives = 43/74 (58%)
 Frame = +3

Query: 195 YASLFSLCASRRAIVETRKVESHLLTFNLTPPIFLLNRAIEAYGKCGCLDDARELFDEMP 374
           +AS+ + CA+   ++ +++V   +  F     + L +  ++ YGKCG + DAR +F E+P
Sbjct: 166 FASVLASCAASSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADARRMFHEIP 225

Query: 375 QRDGGSWNALISAY 416
           Q +  +WN ++  Y
Sbjct: 226 QPNAVTWNVIVRRY 239