BLASTX nr result

ID: Atractylodes21_contig00054609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054609
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306568.1| predicted protein [Populus trichocarpa] gi|1...   116   2e-24
ref|XP_002306298.1| predicted protein [Populus trichocarpa] gi|1...   116   2e-24
ref|XP_003632467.1| PREDICTED: 40S ribosomal protein S6 isoform ...   116   2e-24
ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform ...   116   2e-24
gb|ADU04154.1| hypothetical protein [Gossypium hirsutum]              115   3e-24

>ref|XP_002306568.1| predicted protein [Populus trichocarpa] gi|118482542|gb|ABK93192.1|
           unknown [Populus trichocarpa]
           gi|222856017|gb|EEE93564.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/73 (80%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 6   LEIDDDQKLRAFLDKRISQVVRGDATGEEFKGYVFKIMDGCDKQGFPKKR-ELKPGCVYL 182
           LEIDDDQKLRAF DKRISQ V GDA GEEFKGYVFKIM GCDKQGFP K+  L PG V L
Sbjct: 16  LEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRL 75

Query: 183 LLVRGRPCFRGYG 221
           LL RG PCFRGYG
Sbjct: 76  LLYRGTPCFRGYG 88


>ref|XP_002306298.1| predicted protein [Populus trichocarpa] gi|118485704|gb|ABK94702.1|
           unknown [Populus trichocarpa]
           gi|222855747|gb|EEE93294.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/73 (80%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 6   LEIDDDQKLRAFLDKRISQVVRGDATGEEFKGYVFKIMDGCDKQGFPKKR-ELKPGCVYL 182
           LEIDDDQKLRAF DKRISQ V GDA GEEFKGYVFKIM GCDKQGFP K+  L PG V L
Sbjct: 16  LEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRL 75

Query: 183 LLVRGRPCFRGYG 221
           LL RG PCFRGYG
Sbjct: 76  LLYRGTPCFRGYG 88


>ref|XP_003632467.1| PREDICTED: 40S ribosomal protein S6 isoform 2 [Vitis vinifera]
          Length = 157

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/73 (80%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 6   LEIDDDQKLRAFLDKRISQVVRGDATGEEFKGYVFKIMDGCDKQGFPKKR-ELKPGCVYL 182
           LEIDDDQKLRAF DKRISQ V GDA GEEFKGYVFKIM GCDKQGFP K+  L PG V L
Sbjct: 16  LEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVQL 75

Query: 183 LLVRGRPCFRGYG 221
           LL RG PCFRGYG
Sbjct: 76  LLHRGTPCFRGYG 88


>ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
           gi|297741825|emb|CBI33138.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/73 (80%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 6   LEIDDDQKLRAFLDKRISQVVRGDATGEEFKGYVFKIMDGCDKQGFPKKR-ELKPGCVYL 182
           LEIDDDQKLRAF DKRISQ V GDA GEEFKGYVFKIM GCDKQGFP K+  L PG V L
Sbjct: 16  LEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVQL 75

Query: 183 LLVRGRPCFRGYG 221
           LL RG PCFRGYG
Sbjct: 76  LLHRGTPCFRGYG 88


>gb|ADU04154.1| hypothetical protein [Gossypium hirsutum]
          Length = 249

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/73 (80%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 6   LEIDDDQKLRAFLDKRISQVVRGDATGEEFKGYVFKIMDGCDKQGFPKKR-ELKPGCVYL 182
           LEIDDDQKLRAF DKRISQ V GDA GEEFKGYVFKIM GCDKQGFP K+  L PG V L
Sbjct: 16  LEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRL 75

Query: 183 LLVRGRPCFRGYG 221
           LL RG PCFRGYG
Sbjct: 76  LLHRGTPCFRGYG 88


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