BLASTX nr result

ID: Atractylodes21_contig00054603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054603
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22564.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...    69   3e-10
emb|CBI27489.3| unnamed protein product [Vitis vinifera]               69   3e-10
gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]               67   1e-09
ref|NP_176757.1| DNA helicase domain-containing protein [Arabido...    67   1e-09

>emb|CBI22564.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = +3

Query: 63  RKSKTKNPKLIDVVFSWSVDDVLNTDLYRNKVNRIPETFSSTNHYTQSFLEPLLE 227
           RK++  +  L+D+VFSWS+ DVL  DL+RNKV +IP+TF ST+HY  SF+ PL+E
Sbjct: 7   RKAENADRSLVDLVFSWSLRDVLYKDLHRNKVRKIPDTFLSTSHYLTSFINPLIE 61


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/61 (47%), Positives = 45/61 (73%)
 Frame = +3

Query: 45  KHMATSRKSKTKNPKLIDVVFSWSVDDVLNTDLYRNKVNRIPETFSSTNHYTQSFLEPLL 224
           K  +  +++  K+ +LI+++FSWS++D+ N DLYRN+V RIPETF +  HY  S++ PLL
Sbjct: 3   KEGSNKKRAIAKDSRLIELLFSWSLEDISNNDLYRNQVERIPETFGTAGHYFGSYIFPLL 62

Query: 225 E 227
           E
Sbjct: 63  E 63


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/61 (47%), Positives = 45/61 (73%)
 Frame = +3

Query: 45  KHMATSRKSKTKNPKLIDVVFSWSVDDVLNTDLYRNKVNRIPETFSSTNHYTQSFLEPLL 224
           K  +  +++  K+ +LI+++FSWS++D+ N DLYRN+V RIPETF +  HY  S++ PLL
Sbjct: 3   KEGSNKKRAIAKDSRLIELLFSWSLEDISNNDLYRNQVERIPETFGTAGHYFGSYIFPLL 62

Query: 225 E 227
           E
Sbjct: 63  E 63


>gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]
          Length = 1075

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +3

Query: 57  TSRKSKT-KNPKLIDVVFSWSVDDVLNTDLYRNKVNRIPETFSSTNHYTQSFLEPLLE 227
           T +K K  K   L+DVVFSWS+ DVLN++LYR +V +IP TF+ST  Y +SF++P++E
Sbjct: 10  TKKKEKIIKGRDLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIE 67


>ref|NP_176757.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
           gi|332196304|gb|AEE34425.1| DNA helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 1050

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +3

Query: 57  TSRKSKT-KNPKLIDVVFSWSVDDVLNTDLYRNKVNRIPETFSSTNHYTQSFLEPLLE 227
           T +K K  K   L+DVVFSWS+ DVLN++LYR +V +IP TF+ST  Y +SF++P++E
Sbjct: 10  TKKKEKIIKGRDLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIE 67


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