BLASTX nr result
ID: Atractylodes21_contig00054555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00054555
(281 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi... 112 4e-23
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera] 112 4e-23
ref|XP_002535423.1| pentatricopeptide repeat-containing protein,... 100 1e-19
ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 112 bits (279), Expect = 4e-23
Identities = 51/93 (54%), Positives = 69/93 (74%)
Frame = +3
Query: 3 LRSLKLAMELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTI 182
L L L EL C+ K GFN++++V N L+D+YAK G M D+L FENMK RDI++WNTI
Sbjct: 429 LGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTI 488
Query: 183 IAACSHSKEYDLGFRMNSRMRIEGILPNVVTIL 281
IA+C HS++ +LG RM SRMR EG+ P++ T+L
Sbjct: 489 IASCVHSEDCNLGLRMISRMRTEGVTPDMATML 521
Score = 55.1 bits (131), Expect = 6e-06
Identities = 26/92 (28%), Positives = 51/92 (55%)
Frame = +3
Query: 3 LRSLKLAMELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTI 182
L ++A + + GF + + + NALID+Y + +++ A FE M RD+VSWN++
Sbjct: 128 LLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSL 187
Query: 183 IAACSHSKEYDLGFRMNSRMRIEGILPNVVTI 278
I+ + + ++ + R R G++P+ T+
Sbjct: 188 ISGYNANGYWNEALEIYYRFRNLGVVPDSYTM 219
Score = 54.3 bits (129), Expect = 1e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +3
Query: 48 KTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTIIAACSHSKEYDLGFR 227
K G + V V N LI++Y+K G++ ++ F+ MK +D+V+W +I+AC E R
Sbjct: 545 KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVR 604
Query: 228 MNSRMRIEGILPNVVTIL 281
M GI+P+ V +
Sbjct: 605 AFGEMEAAGIVPDHVAFV 622
>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 112 bits (279), Expect = 4e-23
Identities = 51/93 (54%), Positives = 69/93 (74%)
Frame = +3
Query: 3 LRSLKLAMELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTI 182
L L L EL C+ K GFN++++V N L+D+YAK G M D+L FENMK RDI++WNTI
Sbjct: 488 LGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTI 547
Query: 183 IAACSHSKEYDLGFRMNSRMRIEGILPNVVTIL 281
IA+C HS++ +LG RM SRMR EG+ P++ T+L
Sbjct: 548 IASCVHSEDCNLGLRMISRMRTEGVTPDMATML 580
Score = 55.1 bits (131), Expect = 6e-06
Identities = 26/92 (28%), Positives = 51/92 (55%)
Frame = +3
Query: 3 LRSLKLAMELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTI 182
L ++A + + GF + + + NALID+Y + +++ A FE M RD+VSWN++
Sbjct: 187 LLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSL 246
Query: 183 IAACSHSKEYDLGFRMNSRMRIEGILPNVVTI 278
I+ + + ++ + R R G++P+ T+
Sbjct: 247 ISGYNANGYWNEALEIYYRFRNLGVVPDSYTM 278
Score = 54.3 bits (129), Expect = 1e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +3
Query: 48 KTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTIIAACSHSKEYDLGFR 227
K G + V V N LI++Y+K G++ ++ F+ MK +D+V+W +I+AC E R
Sbjct: 604 KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVR 663
Query: 228 MNSRMRIEGILPNVVTIL 281
M GI+P+ V +
Sbjct: 664 AFGEMEAAGIVPDHVAFV 681
>ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223523164|gb|EEF26960.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 563
Score = 100 bits (249), Expect = 1e-19
Identities = 46/93 (49%), Positives = 69/93 (74%)
Frame = +3
Query: 3 LRSLKLAMELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTI 182
L +L E+ C+ K GF++ ++V NAL+D+Y+K GN++D+L FENMK RDIV+WNTI
Sbjct: 347 LADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTI 406
Query: 183 IAACSHSKEYDLGFRMNSRMRIEGILPNVVTIL 281
IAAC +++ L FRM S+MR E ++P++ T+L
Sbjct: 407 IAACVQAEDCTLAFRMISQMRNEELIPDMGTLL 439
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +3
Query: 3 LRSLKLAMELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTI 182
L ++ +Q ++ GF + + NAL+D+YA+ G++ A N FE M RDIVSWN++
Sbjct: 46 LGDFEIGNVVQNHVLEIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSL 105
Query: 183 IAACSHSKEYDLGFRMNSRMRIEGILPNVVTI 278
I+ S + +D + +RI G+ P+ T+
Sbjct: 106 ISGYSANGYWDEALEIYYELRIAGLKPDNFTL 137
Score = 58.2 bits (139), Expect = 7e-07
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = +3
Query: 27 ELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTIIAACSHSK 206
E+ T K GF ++V V NALI++Y+K N++ + FE+MK +D+V+W +++A
Sbjct: 456 EVHACTFKFGFESTVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYG 515
Query: 207 EYDLGFRMNSRMRIEGILPNVVTIL 281
E R + M GI+P+ + +
Sbjct: 516 EGKKALRAFAEMEEAGIIPDHIAFV 540
Score = 54.3 bits (129), Expect = 1e-05
Identities = 28/93 (30%), Positives = 51/93 (54%)
Frame = +3
Query: 3 LRSLKLAMELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTI 182
LR L+ + +++G V N +ID YAK G++ + F+ +K RD VSWNT+
Sbjct: 247 LRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTL 306
Query: 183 IAACSHSKEYDLGFRMNSRMRIEGILPNVVTIL 281
I S+ Y G ++ +M+++ + P+ +T +
Sbjct: 307 INGYIQSRSYGEGVKLFKKMKMD-LKPDSITFV 338
>ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 88.6 bits (218), Expect = 5e-16
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +3
Query: 30 LQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTIIAACSHSKE 209
+ C+ IK GF A +I+ N+L+DVYAK G M+D L F M DI+SWNT+IA+ H +
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503
Query: 210 YDLGFRMNSRMRIEGILPNVVTIL 281
+GF+M + MR EG++P+ T+L
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVL 527
Score = 60.5 bits (145), Expect = 1e-07
Identities = 27/85 (31%), Positives = 51/85 (60%)
Frame = +3
Query: 27 ELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTIIAACSHSK 206
E+ K+GF ++V + NALI++Y+K G++E+ + F+ MK++D+V+W +I+A
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYG 603
Query: 207 EYDLGFRMNSRMRIEGILPNVVTIL 281
E + M + G+LP+ V +
Sbjct: 604 EGKKALKAFQDMELSGVLPDSVAFI 628
Score = 55.5 bits (132), Expect = 4e-06
Identities = 28/91 (30%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 18 LAMELQC----ETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTII 185
L +EL C ++ GF + + + NALID+Y++ ++++A FE M +RD VSWN++I
Sbjct: 135 LDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLI 194
Query: 186 AACSHSKEYDLGFRMNSRMRIEGILPNVVTI 278
+ + ++ M + R+ G++P+ T+
Sbjct: 195 SGYCSNGFWEDALDMYHKFRMTGMVPDCFTM 225
>ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 88.6 bits (218), Expect = 5e-16
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +3
Query: 30 LQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTIIAACSHSKE 209
+ C+ IK GF A +I+ N+L+DVYAK G M+D L F M DI+SWNT+IA+ H +
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503
Query: 210 YDLGFRMNSRMRIEGILPNVVTIL 281
+GF+M + MR EG++P+ T+L
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVL 527
Score = 60.5 bits (145), Expect = 1e-07
Identities = 27/85 (31%), Positives = 51/85 (60%)
Frame = +3
Query: 27 ELQCETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTIIAACSHSK 206
E+ K+GF ++V + NALI++Y+K G++E+ + F+ MK++D+V+W +I+A
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYG 603
Query: 207 EYDLGFRMNSRMRIEGILPNVVTIL 281
E + M + G+LP+ V +
Sbjct: 604 EGKKALKAFQDMELSGVLPDSVAFI 628
Score = 55.5 bits (132), Expect = 4e-06
Identities = 28/91 (30%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 18 LAMELQC----ETIKTGFNASVIVRNALIDVYAKSGNMEDALNQFENMKDRDIVSWNTII 185
L +EL C ++ GF + + + NALID+Y++ ++++A FE M +RD VSWN++I
Sbjct: 135 LDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLI 194
Query: 186 AACSHSKEYDLGFRMNSRMRIEGILPNVVTI 278
+ + ++ M + R+ G++P+ T+
Sbjct: 195 SGYCSNGFWEDALDMYHKFRMTGMVPDCFTM 225