BLASTX nr result

ID: Atractylodes21_contig00054520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054520
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   173   1e-41
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   151   6e-35
ref|XP_004142023.1| PREDICTED: uncharacterized protein LOC101222...   148   4e-34
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   148   5e-34
emb|CAJ65876.1| putative integrase [Cucumis melo]                     146   2e-33

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  173 bits (439), Expect = 1e-41
 Identities = 78/103 (75%), Positives = 95/103 (92%)
 Frame = +1

Query: 4    IPEVIWEHLSMDFILGLPKSKGFDALLVDVDRLSKYSHFILLKHPYTARNIADIFVREII 183
            +P+ IWE LSMDFI+GLPKSKG++A+LV VDRLSKYSHFILLKHPYTA+ IAD+F+RE++
Sbjct: 929  VPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSKYSHFILLKHPYTAKVIADVFIREVV 988

Query: 184  RLHGIPKSIVSDRDPLFMSQFWQEIFRLQGTKLHMSSSYHPES 312
            RLHGIP SIVSDRDP+FMS FW+E+F+LQGTKL MS +YHPE+
Sbjct: 989  RLHGIPLSIVSDRDPIFMSNFWKELFKLQGTKLKMSIAYHPET 1031


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  151 bits (381), Expect = 6e-35
 Identities = 66/103 (64%), Positives = 87/103 (84%)
 Frame = +1

Query: 4    IPEVIWEHLSMDFILGLPKSKGFDALLVDVDRLSKYSHFILLKHPYTARNIADIFVREII 183
            IP  IWE +SMDF+ GLPKS+G+D +LV VDRLSKY+HFI LKHP+TA  +A +F++EI+
Sbjct: 1170 IPLAIWEDISMDFVEGLPKSQGWDTILVVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIV 1229

Query: 184  RLHGIPKSIVSDRDPLFMSQFWQEIFRLQGTKLHMSSSYHPES 312
            +LHG P +IVSDRD +FMS FW+E+F+LQGT LH S++YHP+S
Sbjct: 1230 KLHGFPSTIVSDRDKVFMSLFWKELFKLQGTLLHRSTAYHPQS 1272


>ref|XP_004142023.1| PREDICTED: uncharacterized protein LOC101222087 [Cucumis sativus]
          Length = 3608

 Score =  148 bits (374), Expect = 4e-34
 Identities = 65/104 (62%), Positives = 85/104 (81%)
 Frame = +1

Query: 1    DIPEVIWEHLSMDFILGLPKSKGFDALLVDVDRLSKYSHFILLKHPYTARNIADIFVREI 180
            +IP  +W  +SMDF+ GL KSKG++ + V VDR SKY HF+ LKHPYTA+ +AD+FV EI
Sbjct: 1039 EIPNSMWRDISMDFVEGLSKSKGYEVIFVVVDRFSKYGHFLPLKHPYTAKTVADLFVNEI 1098

Query: 181  IRLHGIPKSIVSDRDPLFMSQFWQEIFRLQGTKLHMSSSYHPES 312
            +RLHG PKSIVSDRD +F+S FW+E+FRL GT+L+ SS+YHP+S
Sbjct: 1099 VRLHGYPKSIVSDRDKVFLSGFWKELFRLAGTQLNRSSTYHPQS 1142


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/103 (63%), Positives = 85/103 (82%)
 Frame = +1

Query: 4    IPEVIWEHLSMDFILGLPKSKGFDALLVDVDRLSKYSHFILLKHPYTARNIADIFVREII 183
            IP ++WE +SMDFI GLP SKG D +LV VDRLSKY+HF+ L+HP+TA  +AD+FV+E++
Sbjct: 1237 IPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVADLFVKEVV 1296

Query: 184  RLHGIPKSIVSDRDPLFMSQFWQEIFRLQGTKLHMSSSYHPES 312
            RLHG P SIVSDRD +F+S FW+E+FRL GT L  SS+YHP++
Sbjct: 1297 RLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQT 1339


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/100 (65%), Positives = 85/100 (85%)
 Frame = +1

Query: 4   IPEVIWEHLSMDFILGLPKSKGFDALLVDVDRLSKYSHFILLKHPYTARNIADIFVREII 183
           IP  IWE +SMDF+ GLP+SKGFD +LV VDRLSKY+HFI L HP++A+ +A +FV+E++
Sbjct: 35  IPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVALVFVKEVV 94

Query: 184 RLHGIPKSIVSDRDPLFMSQFWQEIFRLQGTKLHMSSSYH 303
           RLHG P+SIVSDRD +F+S FWQE+FRLQGT+L  S++YH
Sbjct: 95  RLHGYPRSIVSDRDRVFLSHFWQELFRLQGTQLKRSTAYH 134


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