BLASTX nr result

ID: Atractylodes21_contig00054509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054509
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   129   3e-28
ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855...   121   5e-26
emb|CBI40924.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_003550921.1| PREDICTED: uncharacterized protein LOC100809...   120   9e-26
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  129 bits (324), Expect = 3e-28
 Identities = 67/90 (74%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
 Frame = -2

Query: 257  MVRKYDMR-----TQALSSYVFIAANVILHATKSTQSRHLDELLPPIVPLLTSHHHSLRG 93
            ++R YDMR     T ALSSYVFIAAN+ILH +K+ QSRHLDELLPPI+PLLTSHHHSLRG
Sbjct: 1333 ILRDYDMRPQVNITSALSSYVFIAANIILHTSKAFQSRHLDELLPPILPLLTSHHHSLRG 1392

Query: 92   FTQLLVYQVLSKLLPALDSGAYGTVSLEKR 3
            FTQLLVYQVLSK+L  LD GA  T  LEKR
Sbjct: 1393 FTQLLVYQVLSKILSPLDCGASETTDLEKR 1422


>ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
          Length = 920

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = -2

Query: 257 MVRKYDMRTQALSSYVFIAANVILHATKSTQSRHLDELLPPIVPLLTSHHHSLRGFTQLL 78
           +++ YDMR QALSSYVFIAANVILHA ++ + RHLDELLPPI+PLLTSHHHSLRGFTQLL
Sbjct: 676 ILQDYDMRPQALSSYVFIAANVILHAPEAVRFRHLDELLPPIIPLLTSHHHSLRGFTQLL 735

Query: 77  VYQVLSKLLPALDSGAYGTVSLEKR 3
           VYQ+  KL P +DSG    + LEKR
Sbjct: 736 VYQIFFKLFP-VDSGVSEILPLEKR 759


>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = -2

Query: 257  MVRKYDMRTQALSSYVFIAANVILHATKSTQSRHLDELLPPIVPLLTSHHHSLRGFTQLL 78
            +++ YDMR QALSSYVFIAANVILHA ++ + RHLDELLPPI+PLLTSHHHSLRGFTQLL
Sbjct: 789  ILQDYDMRPQALSSYVFIAANVILHAPEAVRFRHLDELLPPIIPLLTSHHHSLRGFTQLL 848

Query: 77   VYQVLSKLLPALDSGAYGTVSLEKR 3
            VYQ+  KL P +DSG    + LEKR
Sbjct: 849  VYQIFFKLFP-VDSGVSEILPLEKR 872


>ref|XP_003550921.1| PREDICTED: uncharacterized protein LOC100809637 [Glycine max]
          Length = 834

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/85 (69%), Positives = 70/85 (82%)
 Frame = -2

Query: 257 MVRKYDMRTQALSSYVFIAANVILHATKSTQSRHLDELLPPIVPLLTSHHHSLRGFTQLL 78
           ++R YDMR QALSSYVFIAANVIL+++K  QS HL+EL PP+VPLLTSHHHSLRGFTQLL
Sbjct: 429 ILRDYDMRQQALSSYVFIAANVILNSSKDVQSSHLNELFPPLVPLLTSHHHSLRGFTQLL 488

Query: 77  VYQVLSKLLPALDSGAYGTVSLEKR 3
            YQ+L KL P L+ G+   + LEKR
Sbjct: 489 AYQILHKLFPLLNYGSSEMLPLEKR 513


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
            predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/84 (71%), Positives = 69/84 (82%)
 Frame = -2

Query: 257  MVRKYDMRTQALSSYVFIAANVILHATKSTQSRHLDELLPPIVPLLTSHHHSLRGFTQLL 78
            ++R Y+M+ QALSSYVFIAANVILHA+ + QSRH +ELLPPI+PLLTSHHHSLRGFTQLL
Sbjct: 817  ILRDYNMKPQALSSYVFIAANVILHASNANQSRHFNELLPPIIPLLTSHHHSLRGFTQLL 876

Query: 77   VYQVLSKLLPALDSGAYGTVSLEK 6
            VYQV  K  P LD GA   + LEK
Sbjct: 877  VYQVFCKYFPMLDYGA-SEMPLEK 899


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