BLASTX nr result

ID: Atractylodes21_contig00054502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054502
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|2...    71   1e-10
ref|XP_002987330.1| RHO family GTPase [Selaginella moellendorffi...    66   3e-09
ref|XP_002992192.1| Rop2, RHO family GTPase [Selaginella moellen...    66   3e-09
ref|XP_002982092.1| Rop2, RHO family GTPase [Selaginella moellen...    66   3e-09
gb|ABO15583.1| LLP-Rop1 [Lilium longiflorum]                           66   3e-09

>ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|223534156|gb|EEF35872.1|
           rac gtpase, putative [Ricinus communis]
          Length = 202

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = +1

Query: 1   KQIGAVGYVECSSKTQQSVKTVFDVAIKAVLQPPNTRKQKK 123
           KQIGA+ YVECSSKTQQ+VK VFD AIKAVLQPP T+KQK+
Sbjct: 154 KQIGALAYVECSSKTQQNVKAVFDAAIKAVLQPPKTKKQKR 194


>ref|XP_002987330.1| RHO family GTPase [Selaginella moellendorffii]
           gi|302814977|ref|XP_002989171.1| RHO family GTPase
           [Selaginella moellendorffii] gi|300143071|gb|EFJ09765.1|
           RHO family GTPase [Selaginella moellendorffii]
           gi|300144965|gb|EFJ11645.1| RHO family GTPase
           [Selaginella moellendorffii]
          Length = 196

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   KQIGAVGYVECSSKTQQSVKTVFDVAIKAVLQPPNTRKQKK 123
           KQIGA  Y+ECSSKTQQ+VK VFD AIK VLQPP  +K+KK
Sbjct: 148 KQIGAAAYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKRKK 188


>ref|XP_002992192.1| Rop2, RHO family GTPase [Selaginella moellendorffii]
           gi|300139959|gb|EFJ06689.1| Rop2, RHO family GTPase
           [Selaginella moellendorffii]
          Length = 141

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   KQIGAVGYVECSSKTQQSVKTVFDVAIKAVLQPPNTRKQKK 123
           KQIGA  Y+ECSSKTQQ+VK VFD AIK VLQPP  +K+KK
Sbjct: 93  KQIGAAAYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKK 133


>ref|XP_002982092.1| Rop2, RHO family GTPase [Selaginella moellendorffii]
           gi|302826231|ref|XP_002994630.1| Rop2, RHO family GTPase
           [Selaginella moellendorffii] gi|300137274|gb|EFJ04304.1|
           Rop2, RHO family GTPase [Selaginella moellendorffii]
           gi|300150108|gb|EFJ16760.1| Rop2, RHO family GTPase
           [Selaginella moellendorffii]
          Length = 196

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   KQIGAVGYVECSSKTQQSVKTVFDVAIKAVLQPPNTRKQKK 123
           KQIGA  Y+ECSSKTQQ+VK VFD AIK VLQPP  +K+KK
Sbjct: 148 KQIGAAAYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKK 188


>gb|ABO15583.1| LLP-Rop1 [Lilium longiflorum]
          Length = 197

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   KQIGAVGYVECSSKTQQSVKTVFDVAIKAVLQPPNTRKQKK 123
           K IGA  YVECSSKTQQ+V+ VFD AIKAVLQPP T+K+KK
Sbjct: 148 KTIGAPAYVECSSKTQQNVRAVFDAAIKAVLQPPKTKKKKK 188


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