BLASTX nr result

ID: Atractylodes21_contig00054098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054098
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171764.1| PREDICTED: uncharacterized protein LOC101225...    41   3e-07
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                    44   8e-06

>ref|XP_004171764.1| PREDICTED: uncharacterized protein LOC101225956, partial [Cucumis
           sativus]
          Length = 221

 Score = 40.8 bits (94), Expect(2) = 3e-07
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +2

Query: 11  KVVEKILRTLTDDFTYIVVSIEEPK 85
           KVVEKILR+LTD+F YIV SIEE K
Sbjct: 59  KVVEKILRSLTDNFNYIVSSIEESK 83



 Score = 38.5 bits (88), Expect(2) = 3e-07
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = +1

Query: 79  AKNIKTISIDELQ---LVHE*KLKRHERREDQVLKVSE*XXXXXXXXXXXXXXXXXXXX* 249
           +K+  T++IDELQ   +VHE K +R    E+Q LKV+                       
Sbjct: 82  SKDPNTLTIDELQSSLIVHEQKFQRRGG-EEQALKVTNDEGRGRGSGSYRGRGWG----- 135

Query: 250 TFNKATIKCFKGHHCGHFQ 306
           TFNKA ++CF+    GHFQ
Sbjct: 136 TFNKANVQCFRCQKFGHFQ 154


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score = 43.5 bits (101), Expect(2) = 8e-06
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
 Frame = +1

Query: 52  HVHCGVHRGAKNIKTISIDELQ---LVHE*KLKRHERREDQVLKVSE*XXXXXXXXXXXX 222
           +V C +   + ++ T++IDELQ   LVHE ++  H+  ++QVLKV+              
Sbjct: 145 YVVCSIEE-SNDLTTMTIDELQSSLLVHEQRMHAHDVGDEQVLKVTHENTSGARGRGRGM 203

Query: 223 XXXXXXXX*T--FNKATIKCFKGHHCGHFQ 306
                       FNKA ++C+K H  GHFQ
Sbjct: 204 FRGRGRGRGRQGFNKALVECYKCHKLGHFQ 233



 Score = 30.8 bits (68), Expect(2) = 8e-06
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 14  VVEKILRTLTDDFTYIVVSIEE 79
           +VEKILR++T  + Y+V SIEE
Sbjct: 131 IVEKILRSMTRKYDYVVCSIEE 152


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