BLASTX nr result
ID: Atractylodes21_contig00053965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00053965
(422 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 112 2e-42
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 105 3e-40
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 103 1e-39
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 113 2e-23
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 113 2e-23
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 112 bits (281), Expect(2) = 2e-42
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = -2
Query: 247 NGVAEQMNRTIMEKVQRMLSNSGLVKPFWAEAMSIACYIINRSPSYAIDKKTPIEVWSGK 68
NGVAE+MNRTI+ K + MLSN+GL K FWAEA+S ACY+INRSPSYAIDKKTPIEVWSG
Sbjct: 559 NGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 618
Query: 67 PAYYFDLKIF 38
P Y DL++F
Sbjct: 619 PVNYSDLRVF 628
Score = 84.7 bits (208), Expect(2) = 2e-42
Identities = 34/56 (60%), Positives = 46/56 (82%)
Frame = -3
Query: 414 FATFRDWKTMIEKQTNKKVKYLRTDNGLEFCLEEFNAFCISQGITRHHTVVHTPQQ 247
F F++WKTM+E+QT +KVK LRTDNG+EFC + F ++C S+GI RH+T+ HTPQQ
Sbjct: 503 FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTIPHTPQQ 558
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 105 bits (261), Expect(2) = 3e-40
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = -2
Query: 247 NGVAEQMNRTIMEKVQRMLSNSGLVKPFWAEAMSIACYIINRSPSYAIDKKTPIEVWSGK 68
NGVAE+MNR I+ K + MLSN+GL K FWAEA+S ACY+INRSPSYA +KKTPIEVWSG
Sbjct: 593 NGVAERMNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA-NKKTPIEVWSGS 651
Query: 67 PAYYFDLKIF 38
PA Y DLK+F
Sbjct: 652 PANYSDLKVF 661
Score = 85.1 bits (209), Expect(2) = 3e-40
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = -3
Query: 414 FATFRDWKTMIEKQTNKKVKYLRTDNGLEFCLEEFNAFCISQGITRHHTVVHTPQQ 247
F F++WKTM+E+QT +KVK LRTDNG+EFC + F ++C S+GI RH+TV HTPQQ
Sbjct: 537 FNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQ 592
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 103 bits (258), Expect(2) = 1e-39
Identities = 48/70 (68%), Positives = 56/70 (80%)
Frame = -2
Query: 247 NGVAEQMNRTIMEKVQRMLSNSGLVKPFWAEAMSIACYIINRSPSYAIDKKTPIEVWSGK 68
NGVAE+MN I+ K + MLSN+ L K FWAEA+S CY+INRSPSYA DKKTPIEVWSG
Sbjct: 628 NGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGS 687
Query: 67 PAYYFDLKIF 38
PA Y DL++F
Sbjct: 688 PANYSDLRVF 697
Score = 84.3 bits (207), Expect(2) = 1e-39
Identities = 35/56 (62%), Positives = 45/56 (80%)
Frame = -3
Query: 414 FATFRDWKTMIEKQTNKKVKYLRTDNGLEFCLEEFNAFCISQGITRHHTVVHTPQQ 247
F F++WKTM+E+QT KKVK LRTDNG+EFC + F ++C S+GI H+TV HTPQQ
Sbjct: 572 FDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQ 627
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 113 bits (282), Expect = 2e-23
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = -2
Query: 247 NGVAEQMNRTIMEKVQRMLSNSGLVKPFWAEAMSIACYIINRSPSYAIDKKTPIEVWSGK 68
NGVAE+MNRTI+ K + +LSN+GL K FWAEA+S ACY+INRSPSYAIDKKTPIEVWSG
Sbjct: 800 NGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 859
Query: 67 PAYYFDLKIF 38
PA Y DL++F
Sbjct: 860 PANYSDLRVF 869
Score = 86.3 bits (212), Expect = 2e-15
Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Frame = -3
Query: 414 FATFRDWKTMIEKQTNKKVKYLRTDNGLEFCLEEFNAFCISQGITRHHTVVHTPQQTVWL 235
F F++WKTM+E+QT +KVK LRTDNG+EFC + F ++C S+GI RH+TV HTPQQ
Sbjct: 744 FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQ---- 799
Query: 234 NR*TERLWRRF--SVCCQIPD-------W*SRSGPRPCRLLVTSSTVLPHMPLTRKHLLR 82
N ER+ R C + + W + + C L+ S P + +K +
Sbjct: 800 NGVAERMNRTIISKARCLLSNAGLPKQFW-AEAVSTACYLINRS----PSYAIDKKTPIE 854
Query: 81 CGRANLHIILT*RYFG--RYAKVDNGKLE 1
+ R FG YA VDNGKLE
Sbjct: 855 VWSGSPANYSDLRVFGCTAYAHVDNGKLE 883
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 113 bits (282), Expect = 2e-23
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = -2
Query: 247 NGVAEQMNRTIMEKVQRMLSNSGLVKPFWAEAMSIACYIINRSPSYAIDKKTPIEVWSGK 68
NGVAE+MNRTI+ K + +LSN+GL K FWAEA+S ACY+INRSPSYAIDKKTPIEVWSG
Sbjct: 593 NGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 652
Query: 67 PAYYFDLKIF 38
PA Y DL++F
Sbjct: 653 PANYSDLRVF 662
Score = 86.3 bits (212), Expect = 2e-15
Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Frame = -3
Query: 414 FATFRDWKTMIEKQTNKKVKYLRTDNGLEFCLEEFNAFCISQGITRHHTVVHTPQQTVWL 235
F F++WKTM+E+QT +KVK LRTDNG+EFC + F ++C S+GI RH+TV HTPQQ
Sbjct: 537 FDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQ---- 592
Query: 234 NR*TERLWRRF--SVCCQIPD-------W*SRSGPRPCRLLVTSSTVLPHMPLTRKHLLR 82
N ER+ R C + + W + + C L+ S P + +K +
Sbjct: 593 NGVAERMNRTIISKARCLLSNAGLPKQFW-AEAVSTACYLINRS----PSYAIDKKTPIE 647
Query: 81 CGRANLHIILT*RYFG--RYAKVDNGKLE 1
+ R FG YA VDNGKLE
Sbjct: 648 VWSGSPANYSDLRVFGCTAYAHVDNGKLE 676