BLASTX nr result

ID: Atractylodes21_contig00053932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053932
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab...    64   2e-08
dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]                       64   2e-08
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    64   2e-08
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    64   2e-08
ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550...    62   4e-08

>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
           lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
           ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = -1

Query: 295 GFGFDPITDDYKIVAIY-TSQNTGVVLKSLVYTTKTGTW---CSIASPTTPFFDVLTWGC 128
           GFGFD  T DYK+V +  TS +   +L + VY+ K  +W   C +    +  F   T G 
Sbjct: 188 GFGFDDHTHDYKVVKLVATSVSNQHILDASVYSLKANSWRRICILNYKGSNAFH--TCGV 245

Query: 127 FVNGALHWVVKESMNHCYIMTFDLNTQVFGTIMLPEASRVCS 2
             NGA+HWV+    +H  I+ FDL T+ F  +  P+ +  CS
Sbjct: 246 HFNGAIHWVLTRHEDHRVILVFDLTTEEFREMPFPDEAEDCS 287


>dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]
          Length = 241

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 GFGFDPITDDYKIVAIYTSQNTGVVLKSLVYTTKTGTWCSIASPTTPFFD-VLTWGCFVN 119
           GFGFD +TDDYK+V +  +     +L + VY+ K  +W  I +      D   T G   N
Sbjct: 29  GFGFDGLTDDYKLVKLVATSED--ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFN 86

Query: 118 GALHWVVKESM-NHCYIMTFDLNTQVFGTIMLPEASRVCS 2
           GA+HWV  ES  N   ++ FD+ T+ F  + +P+ +  CS
Sbjct: 87  GAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCS 126


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 GFGFDPITDDYKIVAIYTSQNTGVVLKSLVYTTKTGTWCSIASPTTPFFD-VLTWGCFVN 119
           GFGFD +TDDYK+V +  +     +L + VY+ K  +W  I +      D   T G   N
Sbjct: 204 GFGFDGLTDDYKLVKLVATSED--ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFN 261

Query: 118 GALHWVVKESM-NHCYIMTFDLNTQVFGTIMLPEASRVCS 2
           GA+HWV  ES  N   ++ FD+ T+ F  + +P+ +  CS
Sbjct: 262 GAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCS 301


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 GFGFDPITDDYKIVAIYTSQNTGVVLKSLVYTTKTGTWCSIASPTTPFFD-VLTWGCFVN 119
           GFGFD +TDDYK+V +  +     +L + VY+ K  +W  I +      D   T G   N
Sbjct: 215 GFGFDGLTDDYKLVKLVATSED--ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFN 272

Query: 118 GALHWVVKESM-NHCYIMTFDLNTQVFGTIMLPEASRVCS 2
           GA+HWV  ES  N   ++ FD+ T+ F  + +P+ +  CS
Sbjct: 273 GAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCS 312


>ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1|
           F-box protein [Medicago truncatula]
          Length = 381

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
 Frame = -1

Query: 295 GFGFDPITDDYKIVAIY---TSQNTGVVLKSLVYTTKTGTWCSIASPTTPF--FDVLTWG 131
           GFGFDP+TDDYK++ I+     Q +     + ++++KT +W  +  PT P+  +   T G
Sbjct: 142 GFGFDPLTDDYKLLTIFCFVEIQQSTSESHARLFSSKTNSWKEL--PTMPYTLYYAQTMG 199

Query: 130 CFVNGALHWVVKESMNHC---YIMTFDLNTQVFGTIMLPE 20
            FV  +LHW++ E ++      I+ F+L  ++F  +  PE
Sbjct: 200 VFVENSLHWIMTEKLDPLKPRVIVAFNLTHEIFNEVPFPE 239


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