BLASTX nr result

ID: Atractylodes21_contig00053866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053866
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...   105   3e-21
ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...   104   6e-21
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]   104   6e-21
emb|CBI30347.3| unnamed protein product [Vitis vinifera]              103   1e-20

>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/109 (51%), Positives = 75/109 (68%)
 Frame = +3

Query: 9   SLLKGCKNVANLEQGHAQIIRKGSEQDHFLITQFISVFNTISPNHLSYALTVFDRVLQPS 188
           +LLK CK   +LEQ HA II +G EQDHFL+  FIS  +T+    LSYA +VF RVL PS
Sbjct: 34  TLLKACKKREHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLST-LSYASSVFHRVLAPS 92

Query: 189 IYLWNTLIKCHCRHSSLATSINFFRRMKQSYYVAADKYTFPSLVKACSG 335
             LWNTLIK HC+ +  + +++ F RMK ++    D +T+PS++KACSG
Sbjct: 93  TVLWNTLIKSHCQKNLFSHTLSAFARMK-AHGALPDSFTYPSVIKACSG 140


>ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|222855384|gb|EEE92931.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/107 (44%), Positives = 72/107 (67%)
 Frame = +3

Query: 12  LLKGCKNVANLEQGHAQIIRKGSEQDHFLITQFISVFNTISPNHLSYALTVFDRVLQPSI 191
           L+K CK + +L Q HA II KG EQDHF+I+ F+S+  ++S     Y+ ++F+R+L PS 
Sbjct: 15  LIKSCKTIPHLHQFHAHIIHKGLEQDHFIISHFLSISTSVS-----YSTSIFNRLLNPST 69

Query: 192 YLWNTLIKCHCRHSSLATSINFFRRMKQSYYVAADKYTFPSLVKACS 332
           +L+N L+K   ++S    + + F RMKQS Y  +DKYT+P L+K CS
Sbjct: 70  FLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCS 116


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/108 (49%), Positives = 74/108 (68%)
 Frame = +3

Query: 9   SLLKGCKNVANLEQGHAQIIRKGSEQDHFLITQFISVFNTISPNHLSYALTVFDRVLQPS 188
           +LLK CK   +L Q HA +I+KG EQD FL+TQFIS  N+++  H+SY+ +VFDRVL PS
Sbjct: 34  ALLKLCKTHIDLHQVHAHLIQKGLEQDSFLVTQFISASNSVA--HISYSTSVFDRVLSPS 91

Query: 189 IYLWNTLIKCHCRHSSLATSINFFRRMKQSYYVAADKYTFPSLVKACS 332
            +LWN+L+  +C        I+ + RMK+    A D+YTFPSL+K C+
Sbjct: 92  TFLWNSLVSGYCAKLQFVDIISLYVRMKRE-DGAPDRYTFPSLLKVCA 138


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score =  104 bits (260), Expect = 6e-21
 Identities = 54/108 (50%), Positives = 77/108 (71%)
 Frame = +3

Query: 9   SLLKGCKNVANLEQGHAQIIRKGSEQDHFLITQFISVFNTISPNHLSYALTVFDRVLQPS 188
           +LLK C   + LEQ HA+IIRKG  QDHFLI+QF+++ N++S  + SY  +VF+ V  PS
Sbjct: 30  TLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLS--NFSYTTSVFNGVSSPS 87

Query: 189 IYLWNTLIKCHCRHSSLATSINFFRRMKQSYYVAADKYTFPSLVKACS 332
             LWNT IK +  + S++ +++ F RMK+S  V  DK+T+PSL+KACS
Sbjct: 88  TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAV-PDKFTYPSLIKACS 134


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/108 (49%), Positives = 77/108 (71%)
 Frame = +3

Query: 9   SLLKGCKNVANLEQGHAQIIRKGSEQDHFLITQFISVFNTISPNHLSYALTVFDRVLQPS 188
           +LLK C   + LEQ HA+IIRKG  QDHF+I+QF+++ N++S  + SY  +VF+ V  PS
Sbjct: 78  TLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLS--NFSYTTSVFNGVSSPS 135

Query: 189 IYLWNTLIKCHCRHSSLATSINFFRRMKQSYYVAADKYTFPSLVKACS 332
             LWNT IK +  + S++ +++ F RMK+S  V  DK+T+PSL+KACS
Sbjct: 136 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAV-PDKFTYPSLIKACS 182


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