BLASTX nr result

ID: Atractylodes21_contig00053846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053846
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    63   2e-08
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    62   4e-08
emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]    62   4e-08
emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]    61   8e-08
gb|ABN08665.1| reverse transcriptase - beet retrotransposon, put...    60   2e-07

>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   VPSQGRSEGLLSLWDSSVFVRHECIKGPNSIIVSGSLIGVESLLHIANIYAPRNQAARHE 184
           VPS   S GLL +W++S F     IKG + I++ G  +  +  + I NIYAP + A +  
Sbjct: 704 VPSVQASGGLLCMWNNSHFQVERRIKGGSFIMLEGKWVEEDQWIQIVNIYAPCDLAGKRT 763

Query: 185 LWAELNSI-ILSKQGIWKVMGDFNEIR 262
           LW EL  +   +  G+W  +GDFN +R
Sbjct: 764 LWNELRHLKAANPTGLWCFLGDFNSVR 790


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = +2

Query: 2    SVPSQGRSEGLLSLWDSSVFVRHECIKGPNSIIVSGSLIGVESLLHIANIYAPRNQAARH 181
            ++P+ G S G+L +WD+    R E + G  S+ +  +L G ESL  ++ +Y P N A R 
Sbjct: 889  ALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLW-LSAVYGPNNSALRK 947

Query: 182  ELWAELNSIILSKQGIWKVMGDFNEIR 262
            +LW EL+ I       W V GDFN IR
Sbjct: 948  DLWVELSDIAGLASPRWCVGGDFNVIR 974


>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/87 (37%), Positives = 48/87 (55%)
 Frame = +2

Query: 2    SVPSQGRSEGLLSLWDSSVFVRHECIKGPNSIIVSGSLIGVESLLHIANIYAPRNQAARH 181
            ++P+ G S G+L +WDS    R E + G  S+ +  ++ G ESL  ++ +Y P N A R 
Sbjct: 816  ALPASGASGGILIIWDSIKMRREEVVLGSFSVSIKFAMDGCESLW-LSAVYGPNNSALRK 874

Query: 182  ELWAELNSIILSKQGIWKVMGDFNEIR 262
            + W EL+ I       W V GDFN IR
Sbjct: 875  DFWVELSDIAGLSHPRWCVGGDFNVIR 901


>emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]
          Length = 1780

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/87 (35%), Positives = 48/87 (55%)
 Frame = +2

Query: 2    SVPSQGRSEGLLSLWDSSVFVRHECIKGPNSIIVSGSLIGVESLLHIANIYAPRNQAARH 181
            ++P+ G S G+L +W++    R E + G  S+ +  +L G ESL  ++ +Y P N   R 
Sbjct: 812  ALPASGASGGILIIWEAKKLCREEVVLGSFSVSIKFALDGCESLW-LSAVYGPNNSTLRK 870

Query: 182  ELWAELNSIILSKQGIWKVMGDFNEIR 262
            + W EL+ I+      W V GDFN IR
Sbjct: 871  DFWVELSDIVGLAYPRWCVGGDFNVIR 897


>gb|ABN08665.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 152

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = +2

Query: 11  SQGRSEGLLSLWDSSVFVRHECIKGPNSIIVSGSLIGVESLLHIANIYAPRNQAARHELW 190
           S G S G++++WD SV      +   N +++ GS +    +  +ANIYAP N   R  LW
Sbjct: 63  SVGASGGIITVWDPSVLDVWMTVNIANCLMIKGSFLKNNDMFCLANIYAPSNIRGRQMLW 122

Query: 191 AELNSIILSKQGI-WKVMGDFNEIR 262
             +++ +LS   + W V+GDFN +R
Sbjct: 123 EAVSNFLLSHGDVAWCVLGDFNVVR 147


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