BLASTX nr result

ID: Atractylodes21_contig00053654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053654
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   116   2e-24
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   116   2e-24
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   111   5e-23
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   110   2e-22

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/115 (46%), Positives = 78/115 (67%)
 Frame = +2

Query: 2    LKLVCSKSTAYFCNVPYETKCEMLGILPFKEGTLPVRYLGVPLLSKRLNAKDCKPLMDKI 181
            L +   KST +  ++  ET   +L   PF  G+LPVRYLG+PL++KR+   DC PL++KI
Sbjct: 989  LNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKI 1048

Query: 182  RSRILNWKTKCLSFAGRLQLIQSVLASIPVYWAAVFILPSSIVHGIEKLLRNFLW 346
            RSRI +WK + LS+AGRLQL+ SV++S+  +W + F LP + +  IE++   FLW
Sbjct: 1049 RSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLW 1103


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/115 (49%), Positives = 78/115 (67%)
 Frame = +2

Query: 2    LKLVCSKSTAYFCNVPYETKCEMLGILPFKEGTLPVRYLGVPLLSKRLNAKDCKPLMDKI 181
            LK+   KST +   +    K  +L   PF+ GTLPV+YLG+PLL+KR+   D  PL++KI
Sbjct: 881  LKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKI 940

Query: 182  RSRILNWKTKCLSFAGRLQLIQSVLASIPVYWAAVFILPSSIVHGIEKLLRNFLW 346
            R+RI +W  + LSFAGRLQLI+SVL+SI  +W +VF LP + +  IEK+   FLW
Sbjct: 941  RARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLW 995


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/110 (47%), Positives = 80/110 (72%)
 Frame = +2

Query: 17  SKSTAYFCNVPYETKCEMLGILPFKEGTLPVRYLGVPLLSKRLNAKDCKPLMDKIRSRIL 196
           +KS  +   V    + +++ IL F+EG LP++YLGVPLLS RL A  CK L+D+I S++ 
Sbjct: 26  NKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVR 85

Query: 197 NWKTKCLSFAGRLQLIQSVLASIPVYWAAVFILPSSIVHGIEKLLRNFLW 346
           +W  + LS+AGR+QLI SVL SI VYWA++F+LP  ++  +E+++++FLW
Sbjct: 86  HWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLW 135


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/109 (48%), Positives = 70/109 (64%)
 Frame = +2

Query: 20   KSTAYFCNVPYETKCEMLGILPFKEGTLPVRYLGVPLLSKRLNAKDCKPLMDKIRSRILN 199
            KS  YFC V  ET  E+   +  + G LP RYLGVPL SK+L    CKPL++ I +R   
Sbjct: 725  KSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQT 784

Query: 200  WKTKCLSFAGRLQLIQSVLASIPVYWAAVFILPSSIVHGIEKLLRNFLW 346
            W  K LS+AGRLQLI+S+L+S+  YWA +F L   ++  +EK+ R FLW
Sbjct: 785  WMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLW 833


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/110 (47%), Positives = 74/110 (67%)
 Frame = +2

Query: 17  SKSTAYFCNVPYETKCEMLGILPFKEGTLPVRYLGVPLLSKRLNAKDCKPLMDKIRSRIL 196
           +KS+ +   V       +   + F  G LPVRYLG+PLL  RL + DC PL+ +I SRI 
Sbjct: 6   AKSSIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIR 65

Query: 197 NWKTKCLSFAGRLQLIQSVLASIPVYWAAVFILPSSIVHGIEKLLRNFLW 346
           +W  + LSFAGRLQL++SVL S+ VYWA+VF+LP  +   ++K+LR++LW
Sbjct: 66  SWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLW 115


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