BLASTX nr result

ID: Atractylodes21_contig00053615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053615
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17294.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264...   142   3e-32
ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|NP_567423.1| phragmoplast-associated kinesin-related protein...   131   5e-29
ref|NP_001030750.1| putative phragmoplast-associated kinesin-rel...   131   7e-29

>emb|CBI17294.3| unnamed protein product [Vitis vinifera]
          Length = 1251

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/85 (80%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 RMRPPNKNQE-GEMIVQKTSGDSLSILGQQFTFDYVADATSTQMDLFQLVGAPLVENCLA 77
           RMRPPNK++E GE+I QK SGDSLSILGQ FTFD VADA STQ ++FQLVG+PLVENCL+
Sbjct: 118 RMRPPNKDEEEGEVIAQKMSGDSLSILGQTFTFDSVADAESTQANIFQLVGSPLVENCLS 177

Query: 76  GFNSSIFAYGQTGSGKTYTIWGPTN 2
           GFNSS+FAYGQTGSGKTYT+WGP N
Sbjct: 178 GFNSSVFAYGQTGSGKTYTMWGPAN 202


>ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264192 [Vitis vinifera]
          Length = 1354

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/85 (80%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 RMRPPNKNQE-GEMIVQKTSGDSLSILGQQFTFDYVADATSTQMDLFQLVGAPLVENCLA 77
           RMRPPNK++E GE+I QK SGDSLSILGQ FTFD VADA STQ ++FQLVG+PLVENCL+
Sbjct: 118 RMRPPNKDEEEGEVIAQKMSGDSLSILGQTFTFDSVADAESTQANIFQLVGSPLVENCLS 177

Query: 76  GFNSSIFAYGQTGSGKTYTIWGPTN 2
           GFNSS+FAYGQTGSGKTYT+WGP N
Sbjct: 178 GFNSSVFAYGQTGSGKTYTMWGPAN 202


>ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|222861879|gb|EEE99421.1|
           predicted protein [Populus trichocarpa]
          Length = 1289

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/85 (77%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 RMRPPNKNQE-GEMIVQKTSGDSLSILGQQFTFDYVADATSTQMDLFQLVGAPLVENCLA 77
           RMRP  K++E GE IVQK S +SLSI GQ FTFD VAD  +TQ+DLFQLVGAPLVENCLA
Sbjct: 109 RMRPLKKDEEEGETIVQKLSNNSLSINGQTFTFDSVADTGATQLDLFQLVGAPLVENCLA 168

Query: 76  GFNSSIFAYGQTGSGKTYTIWGPTN 2
           GFNSS+FAYGQTGSGKTYT+WGP N
Sbjct: 169 GFNSSVFAYGQTGSGKTYTMWGPAN 193


>ref|NP_567423.1| phragmoplast-associated kinesin-related protein 1 [Arabidopsis
           thaliana] gi|75173840|sp|Q9LDN0.1|KN12A_ARATH RecName:
           Full=Kinesin-like protein KIN12A; AltName:
           Full=Phragmoplast-associated kinesin-related protein 1;
           Short=AtPAKRP1 gi|8745333|gb|AAF78893.1|
           phragmoplast-associated kinesin-related protein 1
           [Arabidopsis thaliana] gi|8745335|gb|AAF78894.1|
           phragmoplast-associated kinesin-related protein 1
           [Arabidopsis thaliana] gi|332657984|gb|AEE83384.1|
           phragmoplast-associated kinesin-related protein 1
           [Arabidopsis thaliana]
          Length = 1292

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/84 (71%), Positives = 72/84 (85%)
 Frame = -3

Query: 253 RMRPPNKNQEGEMIVQKTSGDSLSILGQQFTFDYVADATSTQMDLFQLVGAPLVENCLAG 74
           RM+P NK +EG+MIV+K S DSL++ GQ FTFD +A+  STQ  +FQLVGAPLVENCL+G
Sbjct: 97  RMKPLNKGEEGDMIVEKMSKDSLTVSGQTFTFDSIANPESTQEQMFQLVGAPLVENCLSG 156

Query: 73  FNSSIFAYGQTGSGKTYTIWGPTN 2
           FNSS+FAYGQTGSGKTYT+WGP N
Sbjct: 157 FNSSVFAYGQTGSGKTYTMWGPAN 180


>ref|NP_001030750.1| putative phragmoplast-associated kinesin-related protein
           [Arabidopsis thaliana] gi|332643278|gb|AEE76799.1|
           putative phragmoplast-associated kinesin-related protein
           [Arabidopsis thaliana]
          Length = 971

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = -3

Query: 253 RMRPPNKNQEGEMIVQKTSGDSLSILGQQFTFDYVADATSTQMDLFQLVGAPLVENCLAG 74
           RM+PP+K +E EMIV+K S D+L+I  Q FTFD +AD  STQ ++FQLVGAPLVENCLAG
Sbjct: 102 RMKPPSKGEEEEMIVKKISNDALTINEQTFTFDSIADPESTQDEIFQLVGAPLVENCLAG 161

Query: 73  FNSSIFAYGQTGSGKTYTIWGPTN 2
           FNSS+FAYGQTGSGKTYT+WGP N
Sbjct: 162 FNSSVFAYGQTGSGKTYTMWGPAN 185


Top