BLASTX nr result

ID: Atractylodes21_contig00053574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053574
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    80   1e-23
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    62   6e-20
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    67   2e-19
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...    72   1e-18
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    69   2e-17

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 80.1 bits (196), Expect(2) = 1e-23
 Identities = 34/54 (62%), Positives = 43/54 (79%)
 Frame = +2

Query: 173  HSGSYRTYRRLAANIYWPGMMATVQRFIQACDICQRCKANSTAPAGLLQPLKIP 334
            HSG YRTYRRLAAN+YW GM  TVQ ++++CD CQR K  +++P GLLQPL +P
Sbjct: 877  HSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQPLPVP 930



 Score = 54.3 bits (129), Expect(2) = 1e-23
 Identities = 25/57 (43%), Positives = 38/57 (66%)
 Frame = +3

Query: 3   DPHIQKMIYDLVQNPDSHPGFLVRHNILYCKGRLVLPKTSKRIPTLLQEFHTSGLGG 173
           D  +QK+I DL ++  S PG++++  +L  +GRLV+   S  IPTLL EFH++  GG
Sbjct: 820 DSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGG 876


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 62.0 bits (149), Expect(2) = 6e-20
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +3

Query: 3    DPHIQKMIYDLVQNPDSHPGFLVRHNILYCKGRLVLPKTSKRIPTLLQEFHTSGLGG 173
            DPH+ K+   L+ +PD++P + + H IL  KGRLVLPK S  +P LLQE H S +GG
Sbjct: 1676 DPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPLVPALLQEGHASVVGG 1732



 Score = 60.1 bits (144), Expect(2) = 6e-20
 Identities = 25/54 (46%), Positives = 36/54 (66%)
 Frame = +2

Query: 173  HSGSYRTYRRLAANIYWPGMMATVQRFIQACDICQRCKANSTAPAGLLQPLKIP 334
            HSG   TY+RL  + +W GM   ++ F++ C +CQ+ K  + +PAGLLQPL IP
Sbjct: 1733 HSGFLXTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQNKTLTLSPAGLLQPLPIP 1786


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 67.4 bits (163), Expect(2) = 2e-19
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = +2

Query: 173  HSGSYRTYRRLAANIYWPGMMATVQRFIQACDICQRCKANSTAPAGLLQPLKIP 334
            HSG  RTY+R+AA +YW GM   ++ ++  C +CQ+ K  + +PAGLLQPL IP
Sbjct: 878  HSGQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIP 931



 Score = 53.1 bits (126), Expect(2) = 2e-19
 Identities = 24/57 (42%), Positives = 37/57 (64%)
 Frame = +3

Query: 3   DPHIQKMIYDLVQNPDSHPGFLVRHNILYCKGRLVLPKTSKRIPTLLQEFHTSGLGG 173
           D  ++ +   L+++PDS P + ++   L+ KGRLVLPKTS  +PT+L  FH   +GG
Sbjct: 821 DDKLKDIFEQLLKDPDSIPRYSIKQGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGG 877


>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score = 72.0 bits (175), Expect(2) = 1e-18
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +2

Query: 173  HSGSYRTYRRLAANIYWPGMMATVQRFIQACDICQRCKANSTAPAGLLQPLKIP 334
            HSG  RTY+R+   +YW GM A V++++Q C++CQR K  +T PAG+LQP+ IP
Sbjct: 1335 HSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIP 1388



 Score = 45.8 bits (107), Expect(2) = 1e-18
 Identities = 26/57 (45%), Positives = 33/57 (57%)
 Frame = +3

Query: 3    DPHIQKMIYDLVQNPDSHPGFLVRHNILYCKGRLVLPKTSKRIPTLLQEFHTSGLGG 173
            D  ++ +I +L QNPD    F   +  L+ K R+VL K S  IPTLL  FH S LGG
Sbjct: 1278 DEELKAIIEELKQNPDEPSKFQWVNGNLWYKKRIVLSKESTLIPTLLHTFHDSILGG 1334


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 69.3 bits (168), Expect(2) = 2e-17
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = +2

Query: 173  HSGSYRTYRRLAANIYWPGMMATVQRFIQACDICQRCKANSTAPAGLLQPLKIP 334
            HSG ++TY+RLA   YW GM   V  F+Q C ICQ+ K ++ +PAGLLQPL IP
Sbjct: 1118 HSGIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIP 1171



 Score = 44.7 bits (104), Expect(2) = 2e-17
 Identities = 21/57 (36%), Positives = 32/57 (56%)
 Frame = +3

Query: 3    DPHIQKMIYDLVQNPDSHPGFLVRHNILYCKGRLVLPKTSKRIPTLLQEFHTSGLGG 173
            D  +Q ++ ++        GF V H +L   GRLV+PK      TLL+E+H+S +GG
Sbjct: 1061 DADLQHLMAEVTAGRTPLQGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGG 1117


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