BLASTX nr result

ID: Atractylodes21_contig00053547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053547
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    97   1e-18
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    87   1e-15
ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211...    84   9e-15
ref|XP_004162300.1| PREDICTED: uncharacterized protein LOC101229...    84   1e-14
ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232...    83   2e-14

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/98 (48%), Positives = 62/98 (63%)
 Frame = +1

Query: 1   LRDKRTRGLCFRCDEKYRVGHVCKRKELQVMLMQXXXXXXXXXXXXXXXXXXXXYHEPEV 180
           L++KR +GLCF+CDEK+ VGH C+RKEL V+ M+                      E   
Sbjct: 408 LQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEIPP 467

Query: 181 ELSLNSVVGLSSPRTMKLKGYISGKEVVVLIDCGASHN 294
           E+SLNSV+GLS+P+TMKL G I   EVVV+ID GA+HN
Sbjct: 468 EVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHN 505


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   LRDKRTRGLCFRCDEKYRVGHVCKRKELQVMLMQXXXXXXXXXXXXXXXXXXXXYHEPEV 180
           L+ KR  GLCFRCDEK+ +GH CK+KEL ++L                        + E+
Sbjct: 342 LQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEI 401

Query: 181 ---ELSLNSVVGLSSPRTMKLKGYISGKEVVVLIDCGASHN 294
              E+SLNSV+G+SSP+T+K++G I G++V+V++D GA+HN
Sbjct: 402 HSPEISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHN 442


>ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
           sativus]
          Length = 674

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
 Frame = +1

Query: 10  KRTRGLCFRCDEKYRVGHVCKRKELQVMLM---------QXXXXXXXXXXXXXXXXXXXX 162
           KR +GLCF+CDEKY  GH CK KE++ + M         +                    
Sbjct: 79  KREKGLCFKCDEKYYSGHKCKAKEIRELQMFVIRADNVEEEIIEEDVYEQRELCTMELKS 138

Query: 163 YHEPEVELSLNSVVGLSSPRTMKLKGYISGKEVVVLIDCGASHN 294
             E  VEL +NSVVGL++P  MK++G I G+EV+VLIDCGA+HN
Sbjct: 139 EIEGVVELCINSVVGLTNPGAMKVRGKIQGREVIVLIDCGATHN 182


>ref|XP_004162300.1| PREDICTED: uncharacterized protein LOC101229007 [Cucumis sativus]
          Length = 746

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/106 (43%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
 Frame = +1

Query: 4   RDKRTRGLCFRCDEKYRVGHVCKRKELQVMLMQXXXXXXXXXXXXXXXXXXXXY------ 165
           + +R +GLCFRC+EKY   H CK KE + + M                            
Sbjct: 246 QSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTEQEELNTIEV 305

Query: 166 ---HEPEVELSLNSVVGLSSPRTMKLKGYISGKEVVVLIDCGASHN 294
               +  VELS+NSVVGLS+P TMK+KG I G+EV+VLIDCGA+HN
Sbjct: 306 TGDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHN 351


>ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus]
          Length = 446

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
 Frame = +1

Query: 10  KRTRGLCFRCDEKYRVGHVCKRKE---LQVMLMQXXXXXXXXXXXXXXXXXXXXYHEPE- 177
           KR +GLCF+CDEKY  GH CK KE   L++ +++                      E + 
Sbjct: 284 KREKGLCFKCDEKYYSGHKCKAKEIRELRMFVVRADDVEEEIIEEDEYDLKGLKTMELQN 343

Query: 178 -----VELSLNSVVGLSSPRTMKLKGYISGKEVVVLIDCGASHN 294
                VEL +NSVVGL++P TMK++G I  KEVVVL+DCGA+HN
Sbjct: 344 DLGEVVELCINSVVGLTNPGTMKIRGTIQSKEVVVLVDCGATHN 387


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