BLASTX nr result

ID: Atractylodes21_contig00053488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053488
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888355.1| expressed protein [Arabidopsis lyrata subsp....    44   1e-07

>ref|XP_002888355.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334196|gb|EFH64614.1| expressed protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 90

 Score = 43.9 bits (102), Expect(2) = 1e-07
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = +3

Query: 9   YPFINSTQLEIDFGLLLFNNLKKVLYRAGKNK-IFSELLIDTTCYFFHSF 155
           YP I    L+ ++    F+ +K  LYR+GK K + SE  +DTTCYFFHSF
Sbjct: 18  YPSIYIYSLDPNWNSFFFD-IKIRLYRSGKQKKMLSEFSLDTTCYFFHSF 66



 Score = 36.6 bits (83), Expect(2) = 1e-07
 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +1

Query: 142 FSIHS-LSGSVVVFQTLPMVWTNP 210
           +  HS LSGSVVV QTLP +WTNP
Sbjct: 61  YFFHSFLSGSVVVLQTLPRIWTNP 84


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