BLASTX nr result

ID: Atractylodes21_contig00053439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053439
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_003637168.1| Polynucleotidyl transferase [Medicago trunca...   141   5e-32
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...   127   7e-28
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   117   7e-25
ref|XP_003541171.1| PREDICTED: uncharacterized protein LOC100785...   116   2e-24

>ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|222838337|gb|EEE76702.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  161 bits (408), Expect = 4e-38
 Identities = 77/144 (53%), Positives = 108/144 (75%)
 Frame = -2

Query: 478 QAADDDIWSRLDAIVLQWIYGTISSDLFTTVLKKETTAADAWAALEGVFNDNKHTRALHL 299
           Q  D D+WSR+DAIVLQWIYGTIS DL   +L++++TAA AW  L  +F+DNK++RAL+L
Sbjct: 8   QDTDPDLWSRVDAIVLQWIYGTISEDLLNIILERDSTAALAWNRLRDIFSDNKNSRALYL 67

Query: 298 EKRFTNCKLDDFSNMSAYCQELKRLSDLLANVEAPVTNDRLVLQLISGLSEAYDGVASHL 119
           E+ F+  +++ F++ S+YCQ LK LSD L+NV +PVTN+RLVLQL SGL++AY  V S +
Sbjct: 68  EQEFSKVQMEHFADASSYCQHLKSLSDQLSNVGSPVTNERLVLQLASGLTDAYASVGSQI 127

Query: 118 QQLSPLPEFSVARSKVILEETRKS 47
                LP F  +RS ++LEET ++
Sbjct: 128 HHGDSLPPFYKSRSMLVLEETTRT 151


>ref|XP_003637168.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355503103|gb|AES84306.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 239

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/139 (50%), Positives = 98/139 (70%)
 Frame = -2

Query: 475 AADDDIWSRLDAIVLQWIYGTISSDLFTTVLKKETTAADAWAALEGVFNDNKHTRALHLE 296
           +A+ + W+ LD+ VLQWIY TIS+DL TT+L+ ++T  +AW     +F DN++ RA+ LE
Sbjct: 49  SAEFEQWTTLDSTVLQWIYSTISTDLLTTILEPDSTTMEAWNRSSDIFQDNQNARAVTLE 108

Query: 295 KRFTNCKLDDFSNMSAYCQELKRLSDLLANVEAPVTNDRLVLQLISGLSEAYDGVASHLQ 116
           + F+N +++DF N+S YCQ LK LSD L NV +PV N  LVLQLI G  +AY  VA+ + 
Sbjct: 109 QEFSNTRMEDFPNVSNYCQRLKMLSDQLRNVGSPVNNHHLVLQLIYGPPKAYRSVATLIC 168

Query: 115 QLSPLPEFSVARSKVILEE 59
           Q +PLP+F  ARS + LEE
Sbjct: 169 QNNPLPKFYQARSMLTLEE 187


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/137 (44%), Positives = 88/137 (64%)
 Frame = -2

Query: 457 WSRLDAIVLQWIYGTISSDLFTTVLKKETTAADAWAALEGVFNDNKHTRALHLEKRFTNC 278
           W   D +V  WIYGTI+  L  T++K   TA D W +LE +F DNK  RAL  E      
Sbjct: 67  WKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTT 126

Query: 277 KLDDFSNMSAYCQELKRLSDLLANVEAPVTNDRLVLQLISGLSEAYDGVASHLQQLSPLP 98
            +DD S +  YCQ+LK LSDLL NV++P+++  LV+ L++GL+E YD + + ++  SP P
Sbjct: 127 TIDDLS-VHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFP 185

Query: 97  EFSVARSKVILEETRKS 47
            F+ ARS +++EE+R S
Sbjct: 186 SFTEARSMLLMEESRLS 202


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/139 (43%), Positives = 85/139 (61%)
 Frame = -2

Query: 457 WSRLDAIVLQWIYGTISSDLFTTVLKKETTAADAWAALEGVFNDNKHTRALHLEKRFTNC 278
           W   D  V  WIYGTIS  +  TVLKK +TA + W A+E +F DNK  RAL LE      
Sbjct: 66  WKERDGHVKMWIYGTISESIIDTVLKKNSTARELWLAIETLFLDNKEARALQLENELRTM 125

Query: 277 KLDDFSNMSAYCQELKRLSDLLANVEAPVTNDRLVLQLISGLSEAYDGVASHLQQLSPLP 98
            + D S +  YC+++K L+DLLAN++ PVT+  LV+ +++GLS+ +D + + ++  SP  
Sbjct: 126 VIGDLS-VHDYCKKMKNLADLLANIDFPVTDRALVMHMLNGLSDKFDSIINVIKHKSPFL 184

Query: 97  EFSVARSKVILEETRKSVQ 41
            F   RS + LEE R S Q
Sbjct: 185 SFLETRSMLQLEEDRLSKQ 203


>ref|XP_003541171.1| PREDICTED: uncharacterized protein LOC100785648 [Glycine max]
          Length = 124

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/102 (55%), Positives = 75/102 (73%)
 Frame = -2

Query: 361 DAWAALEGVFNDNKHTRALHLEKRFTNCKLDDFSNMSAYCQELKRLSDLLANVEAPVTND 182
           +AW  L  +F DNKH+RA+ LE  FT+  ++ FS++SAYCQ LK LSD L NVE PV N 
Sbjct: 2   EAWNRLRDIFQDNKHSRAITLEYDFTHTTMEAFSSVSAYCQHLKSLSDQLKNVEFPVDNS 61

Query: 181 RLVLQLISGLSEAYDGVASHLQQLSPLPEFSVARSKVILEET 56
           RLVLQL+S L+E Y GVA+ ++Q  PLP+F  ARS ++LEE+
Sbjct: 62  RLVLQLVSSLTEPYKGVATLIRQSDPLPQFYQARSMLVLEES 103


Top