BLASTX nr result

ID: Atractylodes21_contig00053401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053401
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
emb|CBI28420.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   101   5e-20
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
emb|CBI32034.3| unnamed protein product [Vitis vinifera]               99   3e-19

>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  114 bits (285), Expect = 8e-24
 Identities = 49/56 (87%), Positives = 53/56 (94%)
 Frame = -2

Query: 303 LKPGIPIRIVKNLRVCNDCHSVTKLLSKLYDREIIVRDNSRYHHFNNGSCSCMDYW 136
           +KPGIPIRI+KNLRVCNDCHSVTKLLSK+Y REIIVRDN R+HHF NGSCSCMDYW
Sbjct: 624 VKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679


>emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  114 bits (285), Expect = 8e-24
 Identities = 49/56 (87%), Positives = 53/56 (94%)
 Frame = -2

Query: 303 LKPGIPIRIVKNLRVCNDCHSVTKLLSKLYDREIIVRDNSRYHHFNNGSCSCMDYW 136
           +KPGIPIRI+KNLRVCNDCHSVTKLLSK+Y REIIVRDN R+HHF NGSCSCMDYW
Sbjct: 576 VKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  101 bits (252), Expect = 5e-20
 Identities = 42/54 (77%), Positives = 48/54 (88%)
 Frame = -2

Query: 297 PGIPIRIVKNLRVCNDCHSVTKLLSKLYDREIIVRDNSRYHHFNNGSCSCMDYW 136
           PG+PIRIVKNLRVC+DCH+ TKLLSK+Y REIIVRD +R+HHF  GSCSC DYW
Sbjct: 748 PGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801


>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449511814|ref|XP_004164061.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 40/56 (71%), Positives = 50/56 (89%)
 Frame = -2

Query: 303 LKPGIPIRIVKNLRVCNDCHSVTKLLSKLYDREIIVRDNSRYHHFNNGSCSCMDYW 136
           +K G PIRI+KNLR+CNDCH+VTKLLS +Y+REII+RD SR+HHF +GSCSC D+W
Sbjct: 626 IKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681


>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 40/55 (72%), Positives = 50/55 (90%)
 Frame = -2

Query: 300 KPGIPIRIVKNLRVCNDCHSVTKLLSKLYDREIIVRDNSRYHHFNNGSCSCMDYW 136
           KPG+PIRI KNLRVCN+CH VTKL+S++++REIIVRD  R+HHF +G+CSCMDYW
Sbjct: 539 KPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCMDYW 593


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