BLASTX nr result

ID: Atractylodes21_contig00053333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053333
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   181   4e-44
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   181   4e-44
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         180   1e-43
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   180   1e-43
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         179   2e-43

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  181 bits (460), Expect = 4e-44
 Identities = 85/126 (67%), Positives = 98/126 (77%)
 Frame = -3

Query: 379 DICGPITPKSFSEKRYFITFIDDCTRNTWVYFLKEKLEAFETFKKFKMMVEKSTGLYIKA 200
           D+CGPI PKS  +  YF+ FIDD +R TWVYFLKEK E FE FKKFK  VEK +GL IK 
Sbjct: 533 DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592

Query: 199 LRSDRGGEYMSTVFINYCVEQGIKRFLTAPYSPQQNGVAERKNQTILDMVRSMLKSKNVP 20
           +RSDRGGE+ S  F+ YC + GI+R LT P SPQQNGVAERKN+TIL+M RSMLKSK +P
Sbjct: 593 MRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLP 652

Query: 19  KEFWAE 2
           KE WAE
Sbjct: 653 KELWAE 658


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  181 bits (460), Expect = 4e-44
 Identities = 85/126 (67%), Positives = 98/126 (77%)
 Frame = -3

Query: 379 DICGPITPKSFSEKRYFITFIDDCTRNTWVYFLKEKLEAFETFKKFKMMVEKSTGLYIKA 200
           D+CGPI PKS  +  YF+ FIDD +R TWVYFLKEK E FE FKKFK  VEK +GL IK 
Sbjct: 533 DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592

Query: 199 LRSDRGGEYMSTVFINYCVEQGIKRFLTAPYSPQQNGVAERKNQTILDMVRSMLKSKNVP 20
           +RSDRGGE+ S  F+ YC + GI+R LT P SPQQNGVAERKN+TIL+M RSMLKSK +P
Sbjct: 593 MRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLP 652

Query: 19  KEFWAE 2
           KE WAE
Sbjct: 653 KELWAE 658


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/126 (66%), Positives = 97/126 (76%)
 Frame = -3

Query: 379 DICGPITPKSFSEKRYFITFIDDCTRNTWVYFLKEKLEAFETFKKFKMMVEKSTGLYIKA 200
           D+CGPI PKS  +  YF+ FIDD +R TWVYFLKEK E FE FKKFK  VEK +GL IK 
Sbjct: 533 DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592

Query: 199 LRSDRGGEYMSTVFINYCVEQGIKRFLTAPYSPQQNGVAERKNQTILDMVRSMLKSKNVP 20
           +RSDRGGE+ S  F+ YC + GI+R LT P SPQQNGV ERKN+TIL+M RSMLKSK +P
Sbjct: 593 MRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLP 652

Query: 19  KEFWAE 2
           KE WAE
Sbjct: 653 KELWAE 658


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/126 (66%), Positives = 97/126 (76%)
 Frame = -3

Query: 379 DICGPITPKSFSEKRYFITFIDDCTRNTWVYFLKEKLEAFETFKKFKMMVEKSTGLYIKA 200
           D+CGPI PKS  +  YF+ FIDD +R TWVYFLKEK E FE FKKFK  VEK +GL IK 
Sbjct: 533 DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592

Query: 199 LRSDRGGEYMSTVFINYCVEQGIKRFLTAPYSPQQNGVAERKNQTILDMVRSMLKSKNVP 20
           +RSDRGGE+ S  F+ YC + GI+R LT P SPQQNGV ERKN+TIL+M RSMLKSK +P
Sbjct: 593 MRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLP 652

Query: 19  KEFWAE 2
           KE WAE
Sbjct: 653 KELWAE 658


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/126 (66%), Positives = 97/126 (76%)
 Frame = -3

Query: 379 DICGPITPKSFSEKRYFITFIDDCTRNTWVYFLKEKLEAFETFKKFKMMVEKSTGLYIKA 200
           D+CGPI PKS  +  YF+ FIDD +R TWVYFLKEK E FE FKKFK  VEK +GL IK 
Sbjct: 30  DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 89

Query: 199 LRSDRGGEYMSTVFINYCVEQGIKRFLTAPYSPQQNGVAERKNQTILDMVRSMLKSKNVP 20
           +RSD GGE+ S  F+ YC + GI+R LT P SPQQNGVAERKN+TIL+M RSMLKSK +P
Sbjct: 90  MRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLP 149

Query: 19  KEFWAE 2
           KE WAE
Sbjct: 150 KELWAE 155


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