BLASTX nr result

ID: Atractylodes21_contig00053320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053320
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]           169   2e-40
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]        169   2e-40
gb|ABJ96383.1| hypothetical protein [Prunus persica]                  168   4e-40
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   167   6e-40
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   166   1e-39

>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
          Length = 1087

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/107 (73%), Positives = 90/107 (84%)
 Frame = +3

Query: 3    GCPDDRRSTGGYAIYLGSNLVSWSARKQRTVSWSSTESEYKALADTVAELTWLQTLLREL 182
            GC DDRRSTGG+AI+LG NL+SWSARKQ TVS SSTE+EYKALA+  AE+ W+QTLL+EL
Sbjct: 937  GCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWIQTLLKEL 996

Query: 183  RVPVKSVPTLWCDNLGATYLSANPVFHARTKHVEVDFHFVREMVAQR 323
             V       LWCDN+GATYLSANPVFHARTKH+EVD+HFVRE V QR
Sbjct: 997  GVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVVQR 1043


>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
          Length = 1131

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/107 (73%), Positives = 90/107 (84%)
 Frame = +3

Query: 3    GCPDDRRSTGGYAIYLGSNLVSWSARKQRTVSWSSTESEYKALADTVAELTWLQTLLREL 182
            GC DDRRSTGG+AI+LG NL+SWSARKQ TVS SSTE+EYKALA+  AE+ W+QTLL+EL
Sbjct: 771  GCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWIQTLLKEL 830

Query: 183  RVPVKSVPTLWCDNLGATYLSANPVFHARTKHVEVDFHFVREMVAQR 323
             V       LWCDN+GATYLSANPVFHARTKH+EVD+HFVRE V QR
Sbjct: 831  GVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVVQR 877


>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score =  168 bits (426), Expect = 4e-40
 Identities = 75/105 (71%), Positives = 92/105 (87%)
 Frame = +3

Query: 3   GCPDDRRSTGGYAIYLGSNLVSWSARKQRTVSWSSTESEYKALADTVAELTWLQTLLREL 182
           GCPDDRRSTGG+AIYLG NLVSWSA+KQ TV+ SSTE+EY+A+A+T  E+TWL++LL+EL
Sbjct: 47  GCPDDRRSTGGFAIYLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWLRSLLQEL 106

Query: 183 RVPVKSVPTLWCDNLGATYLSANPVFHARTKHVEVDFHFVREMVA 317
                + P LWCDNLGATYLSANP+FHARTKHVE+D+HFVR+ V+
Sbjct: 107 GFSTSTSPVLWCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVS 151


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/107 (71%), Positives = 92/107 (85%)
 Frame = +3

Query: 3    GCPDDRRSTGGYAIYLGSNLVSWSARKQRTVSWSSTESEYKALADTVAELTWLQTLLREL 182
            GC DDRRSTGG+A++LG NL+SWSARKQ TVS SSTE+EYKALA+   E+TW++ +L EL
Sbjct: 790  GCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKILDEL 849

Query: 183  RVPVKSVPTLWCDNLGATYLSANPVFHARTKHVEVDFHFVREMVAQR 323
            R+   SV  LWCDNLGATYLSANPVFHARTKH+E+D+HFVRE VA++
Sbjct: 850  RIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKK 896


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/107 (71%), Positives = 91/107 (85%)
 Frame = +3

Query: 3    GCPDDRRSTGGYAIYLGSNLVSWSARKQRTVSWSSTESEYKALADTVAELTWLQTLLREL 182
            GC DDRRST G+A++LGSNL+SWS RKQ TVS SSTE+EYKALA+  AE+ W+QTLL+EL
Sbjct: 920  GCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLKEL 979

Query: 183  RVPVKSVPTLWCDNLGATYLSANPVFHARTKHVEVDFHFVREMVAQR 323
             +   S+  LWCDNLGATYLSANP+FHARTKH+EV FHFVRE VAQ+
Sbjct: 980  GIQCPSMARLWCDNLGATYLSANPIFHARTKHIEVYFHFVRERVAQK 1026


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