BLASTX nr result

ID: Atractylodes21_contig00053264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053264
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
emb|CBI40653.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_002525566.1| pentatricopeptide repeat-containing protein,...   151   5e-35

>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/93 (79%), Positives = 87/93 (93%)
 Frame = +1

Query: 10  HTLAQRNHIPSHVYKHPAAILLELCTSIEELHQIIPLIIKDGLYEEHLFQTKLVSLFCRY 189
           HTL++R HIPSHVYKHPAA+LLELCTS++ELHQIIPL+IK+GLY EHLFQTKLVSLF +Y
Sbjct: 35  HTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKY 94

Query: 190 GSLTEATRVFEPIENKNDAVYHTMLKGYAQNSS 288
           GS+ EA RVFEPI++K DA+YHTMLKGYA+NSS
Sbjct: 95  GSINEAARVFEPIDDKLDALYHTMLKGYAKNSS 127


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/93 (79%), Positives = 87/93 (93%)
 Frame = +1

Query: 10  HTLAQRNHIPSHVYKHPAAILLELCTSIEELHQIIPLIIKDGLYEEHLFQTKLVSLFCRY 189
           HTL++R HIPSHVYKHPAA+LLELCTS++ELHQIIPL+IK+GLY EHLFQTKLVSLF +Y
Sbjct: 35  HTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKY 94

Query: 190 GSLTEATRVFEPIENKNDAVYHTMLKGYAQNSS 288
           GS+ EA RVFEPI++K DA+YHTMLKGYA+NSS
Sbjct: 95  GSINEAARVFEPIDDKLDALYHTMLKGYAKNSS 127


>emb|CBI40653.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/100 (72%), Positives = 86/100 (86%)
 Frame = +1

Query: 4   VQHTLAQRNHIPSHVYKHPAAILLELCTSIEELHQIIPLIIKDGLYEEHLFQTKLVSLFC 183
           +  T + R +IPSHVYKHP+AILLELCTS++ELHQ IPLIIK+GLY EHLFQTKLVSLFC
Sbjct: 67  LHRTPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFC 126

Query: 184 RYGSLTEATRVFEPIENKNDAVYHTMLKGYAQNSSTFDGL 303
           ++GSL EA RVF+PIE+K D +YHTMLKGYA+NSS  D +
Sbjct: 127 KFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAV 166


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/100 (72%), Positives = 86/100 (86%)
 Frame = +1

Query: 4   VQHTLAQRNHIPSHVYKHPAAILLELCTSIEELHQIIPLIIKDGLYEEHLFQTKLVSLFC 183
           +  T + R +IPSHVYKHP+AILLELCTS++ELHQ IPLIIK+GLY EHLFQTKLVSLFC
Sbjct: 61  LHRTPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFC 120

Query: 184 RYGSLTEATRVFEPIENKNDAVYHTMLKGYAQNSSTFDGL 303
           ++GSL EA RVF+PIE+K D +YHTMLKGYA+NSS  D +
Sbjct: 121 KFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAV 160


>ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535145|gb|EEF36825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 563

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/93 (74%), Positives = 82/93 (88%)
 Frame = +1

Query: 10  HTLAQRNHIPSHVYKHPAAILLELCTSIEELHQIIPLIIKDGLYEEHLFQTKLVSLFCRY 189
           +TL +R +IP H+YKHP A+LLELCTS++ELHQIIP IIK+G Y E LFQTKL+SLFC Y
Sbjct: 30  NTLPRRTYIPGHIYKHPTAVLLELCTSVKELHQIIPSIIKNGFYSEELFQTKLISLFCNY 89

Query: 190 GSLTEATRVFEPIENKNDAVYHTMLKGYAQNSS 288
           GSLTEA RVFEPIENK +A+YHTMLKG+A+NSS
Sbjct: 90  GSLTEAARVFEPIENKLEALYHTMLKGFAKNSS 122


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