BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053229
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        174   5e-42
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   166   2e-39
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   164   7e-39
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   164   7e-39
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   164   7e-39

>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/116 (73%), Positives = 100/116 (86%)
 Frame = +1

Query: 1    IFKKKEGIPGVESARYKARLVARGFTQVEGVDFTKVFSSVVKHKSIWLLLSMVAEFNMEL 180
            IFK+ EGIP VE  +YKARLVARGFTQ EGVDF ++FS VVKH SI +LL+MVA  ++EL
Sbjct: 863  IFKRNEGIPDVEPPKYKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLEL 922

Query: 181  EQMDVKTAFLYGNLDETILMSQPEGFKVKGKEDYVCKLNRSLYGLKQSPRQWNKRF 348
            EQMDVKTAFL+GNL+E ILM+QPEGF+ K KEDYVC L++SLYGLKQSPRQW +RF
Sbjct: 923  EQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRF 978


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/116 (68%), Positives = 98/116 (84%)
 Frame = +1

Query: 1    IFKKKEGIPGVESARYKARLVARGFTQVEGVDFTKVFSSVVKHKSIWLLLSMVAEFNMEL 180
            IFK+K GIPGVE  RYKARLVA+GF+Q EG+D+ ++FS VVKH SI  LLS+V +F+MEL
Sbjct: 872  IFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMEL 931

Query: 181  EQMDVKTAFLYGNLDETILMSQPEGFKVKGKEDYVCKLNRSLYGLKQSPRQWNKRF 348
            EQ+DVKTAFL+GNLDE ILMSQPEG++ +   + VC L +SLYGLKQSPRQWN+RF
Sbjct: 932  EQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRF 987


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/116 (68%), Positives = 93/116 (80%)
 Frame = +1

Query: 1    IFKKKEGIPGVESARYKARLVARGFTQVEGVDFTKVFSSVVKHKSIWLLLSMVAEFNMEL 180
            IFK+KEG+   E  +YKARLVARG++Q+ GVD+  VFS VVKH SI   LS+VA  ++EL
Sbjct: 866  IFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLEL 925

Query: 181  EQMDVKTAFLYGNLDETILMSQPEGFKVKGKEDYVCKLNRSLYGLKQSPRQWNKRF 348
            EQ+DVKTAFL+G L+E I M QPEGF V GKE YVCKL RSLYGLKQSPRQWNKRF
Sbjct: 926  EQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRF 981


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/116 (68%), Positives = 93/116 (80%)
 Frame = +1

Query: 1    IFKKKEGIPGVESARYKARLVARGFTQVEGVDFTKVFSSVVKHKSIWLLLSMVAEFNMEL 180
            IFK+KEG+   E  +YKARLVARG++Q+ GVD+  VFS VVKH SI   LS+VA  ++EL
Sbjct: 866  IFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLEL 925

Query: 181  EQMDVKTAFLYGNLDETILMSQPEGFKVKGKEDYVCKLNRSLYGLKQSPRQWNKRF 348
            EQ+DVKTAFL+G L+E I M QPEGF V GKE YVCKL RSLYGLKQSPRQWNKRF
Sbjct: 926  EQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRF 981


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/116 (68%), Positives = 93/116 (80%)
 Frame = +1

Query: 1    IFKKKEGIPGVESARYKARLVARGFTQVEGVDFTKVFSSVVKHKSIWLLLSMVAEFNMEL 180
            IFK+KEG+   E  +YKARLVARG++Q+ GVD+  VFS VVKH SI   LS+VA  ++EL
Sbjct: 866  IFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLEL 925

Query: 181  EQMDVKTAFLYGNLDETILMSQPEGFKVKGKEDYVCKLNRSLYGLKQSPRQWNKRF 348
            EQ+DVKTAFL+G L+E I M QPEGF V GKE YVCKL RSLYGLKQSPRQWNKRF
Sbjct: 926  EQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRF 981