BLASTX nr result

ID: Atractylodes21_contig00053193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053193
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138606.1| PREDICTED: TBC1 domain family member 2A-like...    60   1e-07
ref|NP_566323.1| RabGAP/TBC domain-containing protein [Arabidops...    60   1e-07
ref|XP_002884671.1| RabGAP/TBC domain-containing protein [Arabid...    60   1e-07
ref|XP_002532289.1| conserved hypothetical protein [Ricinus comm...    59   4e-07

>ref|XP_004138606.1| PREDICTED: TBC1 domain family member 2A-like [Cucumis sativus]
           gi|449490052|ref|XP_004158494.1| PREDICTED: TBC1 domain
           family member 2A-like [Cucumis sativus]
          Length = 395

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MYAAQRKRDLSLEIQPEIPFLRPSIHARRA--VVKFQDLYGF 3
           M+  Q KRD++LE+Q +IP LRPSIHARRA   VKFQDLYGF
Sbjct: 1   MFGTQSKRDIALELQAQIPILRPSIHARRANITVKFQDLYGF 42


>ref|NP_566323.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|145332002|ref|NP_001078123.1| RabGAP/TBC
           domain-containing protein [Arabidopsis thaliana]
           gi|98960973|gb|ABF58970.1| At3g07890 [Arabidopsis
           thaliana] gi|110737642|dbj|BAF00761.1| putative GTPase
           activator protein [Arabidopsis thaliana]
           gi|332641094|gb|AEE74615.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
           gi|332641095|gb|AEE74616.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 400

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/42 (69%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MYAAQRKRDLSLEIQPEIPFLRPSIHARRA--VVKFQDLYGF 3
           M+  Q +RDL++E+Q +IP LRPSIHARRA  VVKFQDLYGF
Sbjct: 1   MFGIQSRRDLTMELQSQIPILRPSIHARRANIVVKFQDLYGF 42


>ref|XP_002884671.1| RabGAP/TBC domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330511|gb|EFH60930.1| RabGAP/TBC
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 400

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/42 (69%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MYAAQRKRDLSLEIQPEIPFLRPSIHARRA--VVKFQDLYGF 3
           M+  Q +RDL++E+Q +IP LRPSIHARRA  VVKFQDLYGF
Sbjct: 1   MFGIQSRRDLTMELQSQIPILRPSIHARRANIVVKFQDLYGF 42


>ref|XP_002532289.1| conserved hypothetical protein [Ricinus communis]
           gi|223528023|gb|EEF30104.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MYAAQRKRDLSLEIQPEIPFLRPSIHARRA--VVKFQDLYGF 3
           MY    KR++SL+ QP+IP LRPSIH+RRA   VKFQDLYGF
Sbjct: 1   MYKTHTKREVSLDFQPQIPILRPSIHSRRANLTVKFQDLYGF 42


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