BLASTX nr result

ID: Atractylodes21_contig00053181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053181
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrat...   109   2e-22
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   108   6e-22
gb|ACF87376.2| unknown [Zea mays]                                     107   1e-21
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   107   1e-21
gb|ADB85383.1| putative retrotransposon protein [Phyllostachys e...   107   1e-21

>gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrata subsp. petraea]
          Length = 471

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/115 (53%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
 Frame = +2

Query: 2   SKRQPTLSRSGAKAEYRGVAKAIAETSWLRNLLLEHNRPIKKP--LWC----IVTILVQF 163
           +KRQPT SRS  +AEY+GVA  +AE +W+RNLLLE +RPI     ++C     V +    
Sbjct: 343 AKRQPTPSRSSTEAEYKGVANTVAELTWIRNLLLEIHRPISAASIVYCDNVSSVYLSTNP 402

Query: 164 ISPAIP*HIEMDIHFVREKVAIGQVGVLHVPSSSLMPDIFTKGLSSTLFQEFGSS 328
           +      HIE+DIHFVR+KVAIG+V V HVP+S    DIFTKGL ST+  EF SS
Sbjct: 403 VQHQRTKHIELDIHFVRDKVAIGEVKVFHVPTSLQYADIFTKGLPSTIHSEFRSS 457


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  108 bits (269), Expect = 6e-22
 Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
 Frame = +2

Query: 2    SKRQPTLSRSGAKAEYRGVAKAIAETSWLRNLLLEHNRPIKKP--LWCIVTILVQFISPA 175
            SKRQ T+SRS A+AEYR VA A+AE  WLR LLLE + P+     ++C     V   +  
Sbjct: 935  SKRQTTVSRSSAEAEYRAVAHAVAECCWLRQLLLELHIPLASATTVYCDNVSAVYMTANP 994

Query: 176  I----P*HIEMDIHFVREKVAIGQVGVLHVPSSSLMPDIFTKGLSSTLFQEFGSSPII-- 337
            +      HIE+DIHFVREKVA+GQV VLHVPSS    DI TKGL   LF EF SS  +  
Sbjct: 995  VHHRQTKHIEIDIHFVREKVALGQVHVLHVPSSHQFADIMTKGLPVQLFTEFRSSLCVRD 1054

Query: 338  CPPVSTA 358
             PP  TA
Sbjct: 1055 VPPTLTA 1061


>gb|ACF87376.2| unknown [Zea mays]
          Length = 526

 Score =  107 bits (267), Expect = 1e-21
 Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
 Frame = +2

Query: 2   SKRQPTLSRSGAKAEYRGVAKAIAETSWLRNLLLEHNRPIKKP--LWCIVTILVQFISPA 175
           SKRQ T+SRS A+AEYRGVA A+AE  WLR LL E   P ++   ++C     +   S  
Sbjct: 401 SKRQHTVSRSSAEAEYRGVANAVAEICWLRQLLTELCHPPRRAAVVFCDNVSTMYLASNP 460

Query: 176 IP*----HIEMDIHFVREKVAIGQVGVLHVPSSSLMPDIFTKGLSSTLFQEFGSSPIICP 343
           +      H+E+D+HFVRE+V++G+V V+HVPSS    DIFTKGLSS+LF+EF S+  I P
Sbjct: 461 VQHQRTKHVEIDLHFVRERVSLGEVKVIHVPSSLQFADIFTKGLSSSLFKEFRSNLQIKP 520


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  107 bits (267), Expect = 1e-21
 Identities = 61/119 (51%), Positives = 78/119 (65%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2    SKRQPTLSRSGAKAEYRGVAKAIAETSWLRNLLLE-HNRPIKKPLWCIVTILVQFISP-- 172
            SKRQ T+SRS A+AEYR +A A+AET WLR LL E H  P K  L     +   ++S   
Sbjct: 981  SKRQHTVSRSSAEAEYRAMANAVAETCWLRQLLHELHTPPSKATLVYCDNVSAVYLSTNP 1040

Query: 173  ---AIP*HIEMDIHFVREKVAIGQVGVLHVPSSSLMPDIFTKGLSSTLFQEFGSSPIIC 340
                   H+E+D+HFVR++VA+G V VLHVP++S   DIFTKGL S+LF EF SS  +C
Sbjct: 1041 VQHQRTKHVEIDLHFVRDRVAVGSVRVLHVPTTSQYADIFTKGLPSSLFVEFRSSLNVC 1099


>gb|ADB85383.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 862

 Score =  107 bits (266), Expect = 1e-21
 Identities = 59/106 (55%), Positives = 74/106 (69%)
 Frame = +2

Query: 2   SKRQPTLSRSGAKAEYRGVAKAIAETSWLRNLLLEHNRPIKKPLWCIVTILVQFISPAIP 181
           SKRQ T+SRS A+AEYR VA A+AETSWLR LLLE + P++         LV   +    
Sbjct: 631 SKRQHTVSRSSAEAEYRAVANAVAETSWLRQLLLELHCPLQH------ATLVYCDNHQHT 684

Query: 182 *HIEMDIHFVREKVAIGQVGVLHVPSSSLMPDIFTKGLSSTLFQEF 319
            H+E+D+HFVRE+VA+G V VLHVP++S   DIFTKGL S +F EF
Sbjct: 685 KHVELDLHFVRERVAVGAVRVLHVPTTSQYVDIFTKGLPSFVFAEF 730


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