BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053104
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   157   1e-36
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   154   9e-36
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     153   1e-35
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]         152   2e-35
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   151   5e-35

>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/101 (70%), Positives = 86/101 (85%)
 Frame = -1

Query: 304 SERRNRTLLDMVRSMMSRTTLPISFWGHAVLSAARILNMVPTKKVNKTPYELWKGRVPNL 125
           SERRNRTLLD+VRSMMS+T LP+SFW +A+  AA  LN VP+K VNKTPYE+W G+ P+L
Sbjct: 396 SERRNRTLLDIVRSMMSQTDLPLSFWAYALEKAAFTLNKVPSKSVNKTPYEIWTGKRPSL 455

Query: 124 SYLKVWGCEVYVRRETSNKLEPRSIKCIFVGYPKETRGYYF 2
           S+LK+WGCEVYV+R  S+KL P+S KC FVGYPKET+GYYF
Sbjct: 456 SFLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKETKGYYF 496


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/101 (69%), Positives = 87/101 (86%)
 Frame = -1

Query: 304 SERRNRTLLDMVRSMMSRTTLPISFWGHAVLSAARILNMVPTKKVNKTPYELWKGRVPNL 125
           SERRNRTLLDMVRSMMS+T LP+SFWG+A+ +AA  LN VP+K ++KTPYE+W G+ P+L
Sbjct: 271 SERRNRTLLDMVRSMMSQTDLPLSFWGYALETAAFTLNRVPSKSLDKTPYEIWTGKRPSL 330

Query: 124 SYLKVWGCEVYVRRETSNKLEPRSIKCIFVGYPKETRGYYF 2
           S+LK+WGCEVYV+R  S+KL P+S K  FVGYPKET+GYYF
Sbjct: 331 SFLKIWGCEVYVKRLQSDKLTPKSDKYFFVGYPKETKGYYF 371


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/101 (68%), Positives = 85/101 (84%)
 Frame = -1

Query: 304 SERRNRTLLDMVRSMMSRTTLPISFWGHAVLSAARILNMVPTKKVNKTPYELWKGRVPNL 125
           SERRNRTLLDMVRSMMS++ LP+SFWG+A+ +AA  LN VP+K V KTPYE+W G+ P+L
Sbjct: 600 SERRNRTLLDMVRSMMSQSDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSL 659

Query: 124 SYLKVWGCEVYVRRETSNKLEPRSIKCIFVGYPKETRGYYF 2
           S+LK+WGCE YV+R  S+KL P+S KC  VGYPKET+GYYF
Sbjct: 660 SFLKIWGCEAYVKRLQSDKLTPKSDKCFVVGYPKETKGYYF 700


>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/101 (68%), Positives = 86/101 (85%)
 Frame = -1

Query: 304 SERRNRTLLDMVRSMMSRTTLPISFWGHAVLSAARILNMVPTKKVNKTPYELWKGRVPNL 125
           SERRNRTLLDMV+SMMS+T LP+ FWG+A+ +AA  LN VP+K V+KT YE+W G+ P+L
Sbjct: 394 SERRNRTLLDMVQSMMSQTDLPLCFWGYALETAAFTLNRVPSKSVDKTSYEIWTGKRPSL 453

Query: 124 SYLKVWGCEVYVRRETSNKLEPRSIKCIFVGYPKETRGYYF 2
           S+LK+WGCEVYV+R  S+KL P+S KC FVGYPKET+GYYF
Sbjct: 454 SFLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKETKGYYF 494


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  151 bits (382), Expect = 5e-35
 Identities = 68/101 (67%), Positives = 83/101 (82%)
 Frame = -1

Query: 304 SERRNRTLLDMVRSMMSRTTLPISFWGHAVLSAARILNMVPTKKVNKTPYELWKGRVPNL 125
           SERRNRTLLDMVRSMMS T LP  FWG+A+ ++A +LN  P+K V KTPYE+W G+VPNL
Sbjct: 244 SERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPNL 303

Query: 124 SYLKVWGCEVYVRRETSNKLEPRSIKCIFVGYPKETRGYYF 2
           S+LK+WGCE Y +R  ++KL P+S KC FVGYPKET+GYYF
Sbjct: 304 SFLKIWGCESYAKRLITDKLGPKSDKCYFVGYPKETKGYYF 344