BLASTX nr result

ID: Atractylodes21_contig00053086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053086
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22579.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...   133   1e-29
ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ...   122   2e-26
ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_004166173.1| PREDICTED: uncharacterized LOC101218315 [Cuc...   110   2e-22

>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
          Length = 1217

 Score =  133 bits (335), Expect = 1e-29
 Identities = 72/132 (54%), Positives = 89/132 (67%)
 Frame = +1

Query: 1   ARAHLDASIKVEGGAEATATDLKSLMEEEKAKRRQTILCNLGSRSQFNGAFTRLTMDGSK 180
           A+AHL+ S KV+G  + +   LKS++EEE+ KR+   +  L   SQF GAFTR+TMDGSK
Sbjct: 237 AKAHLNCS-KVDGDTKTSLNGLKSIIEEEEEKRKLLRIRKLNRSSQFCGAFTRVTMDGSK 295

Query: 181 VLVKGNPCSDSHDTLLKGHKNQRGSSKKMPWDSERMPTTNKNILRLLHDFTNQFLSGGYN 360
              KGNP   SHD  LK  +  RG  KK+ WD   +P+   NIL L+HDF NQFLSGGYN
Sbjct: 296 TFFKGNPTFTSHDKFLK-PQVPRGPLKKIVWDHGSLPSAKDNILELVHDFVNQFLSGGYN 354

Query: 361 VLMHTIREDIEK 396
           VLM +I EDIEK
Sbjct: 355 VLMQSICEDIEK 366


>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score =  133 bits (335), Expect = 1e-29
 Identities = 72/132 (54%), Positives = 89/132 (67%)
 Frame = +1

Query: 1   ARAHLDASIKVEGGAEATATDLKSLMEEEKAKRRQTILCNLGSRSQFNGAFTRLTMDGSK 180
           A+AHL+ S KV+G  + +   LKS++EEE+ KR+   +  L   SQF GAFTR+TMDGSK
Sbjct: 235 AKAHLNCS-KVDGDTKTSLNGLKSIIEEEEEKRKLLRIRKLNRSSQFCGAFTRVTMDGSK 293

Query: 181 VLVKGNPCSDSHDTLLKGHKNQRGSSKKMPWDSERMPTTNKNILRLLHDFTNQFLSGGYN 360
              KGNP   SHD  LK  +  RG  KK+ WD   +P+   NIL L+HDF NQFLSGGYN
Sbjct: 294 TFFKGNPTFTSHDKFLK-PQVPRGPLKKIVWDHGSLPSAKDNILELVHDFVNQFLSGGYN 352

Query: 361 VLMHTIREDIEK 396
           VLM +I EDIEK
Sbjct: 353 VLMQSICEDIEK 364


>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
           gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
           factor [Medicago truncatula]
          Length = 1335

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/123 (52%), Positives = 83/123 (67%)
 Frame = +1

Query: 28  KVEGGAEATATDLKSLMEEEKAKRRQTILCNLGSRSQFNGAFTRLTMDGSKVLVKGNPCS 207
           K +  ++A+   L+S+MEEEK KR  + L N+G  SQFN  F R+TMDGSK +VKGNP S
Sbjct: 245 KADEDSQASLDSLQSIMEEEKKKRIISRLGNIGRHSQFNATFARVTMDGSKAVVKGNPNS 304

Query: 208 DSHDTLLKGHKNQRGSSKKMPWDSERMPTTNKNILRLLHDFTNQFLSGGYNVLMHTIRED 387
            SH+  LK     RG +K + WD  ++P+T   IL LL  F +QFLS GYNVLM ++RED
Sbjct: 305 -SHNMHLKSQNVTRGRAKTIAWDHPKLPSTTDTILELLRGFVDQFLSVGYNVLMRSVRED 363

Query: 388 IEK 396
           IEK
Sbjct: 364 IEK 366


>ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|222875069|gb|EEF12200.1|
           predicted protein [Populus trichocarpa]
          Length = 1341

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/120 (55%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
 Frame = +1

Query: 40  GAEATATDLKSLM-EEEKAKRRQTILCNLGSRSQFNGAFTRLTMDGSKVLVKGNPCSDSH 216
           G+  +   LKS+M EEE+ K + +   N+   SQF+G FT LTMDGSK +  GNP S S 
Sbjct: 248 GSSTSLDILKSIMKEEEQKKMKLSRQRNVVRHSQFSGTFTWLTMDGSKAVCLGNPSSASQ 307

Query: 217 DTLLKGHKNQRGSSKKMPWDSERMPTTNKNILRLLHDFTNQFLSGGYNVLMHTIREDIEK 396
             LLK +K Q+G SKK+ WD  R+P+   NIL LLHDF NQFLSGGYN LM +IREDIEK
Sbjct: 308 -ILLKPYKAQKGPSKKILWDHGRLPSMKDNILELLHDFLNQFLSGGYNDLMESIREDIEK 366


>ref|XP_004166173.1| PREDICTED: uncharacterized LOC101218315 [Cucumis sativus]
          Length = 1190

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/116 (51%), Positives = 78/116 (67%)
 Frame = +1

Query: 49  ATATDLKSLMEEEKAKRRQTILCNLGSRSQFNGAFTRLTMDGSKVLVKGNPCSDSHDTLL 228
           ++   LKS+MEE++  R+ + L NL   SQF+G FTR T+DGSK+++KG P S S  T  
Sbjct: 252 SSVNSLKSMMEEDR--RKFSRLQNLNRHSQFSGTFTRQTLDGSKLVLKGKP-SLSSSTSH 308

Query: 229 KGHKNQRGSSKKMPWDSERMPTTNKNILRLLHDFTNQFLSGGYNVLMHTIREDIEK 396
           K  K  RG  KK+ WD  R+ + N  +L+LLHDF NQFLSGGYN LM  + EDIEK
Sbjct: 309 KPPKVCRGPIKKIAWDLGRLTSKNSKLLQLLHDFINQFLSGGYNALMQLVHEDIEK 364


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