BLASTX nr result

ID: Atractylodes21_contig00052477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052477
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    64   1e-08
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]               63   3e-08
gb|ABA27027.1| TO70-3 [Taraxacum officinale]                           62   6e-08
gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsi...    62   6e-08
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              60   1e-07

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -2

Query: 250  LVLQKIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRRWSANHLKLYH 71
            LVL+K+F+NT +  + KL A WEGPY I+ V+  G Y     D  PIPR W++ +LK Y+
Sbjct: 1727 LVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
          Length = 755

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = -2

Query: 262 HSMKLVLQKIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRRWSANHL 83
           H    VLQK+FQNT + ++ KL   WEGPY I+ ++    Y   D   + +PR W+A HL
Sbjct: 691 HEGDRVLQKVFQNTAEPNTGKLGTNWEGPYLISKIVRPEVYELADLSGKAVPRSWNAMHL 750

Query: 82  KLYH 71
           + Y+
Sbjct: 751 RKYY 754


>gb|ABA27027.1| TO70-3 [Taraxacum officinale]
          Length = 97

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/56 (50%), Positives = 35/56 (62%)
 Frame = -2

Query: 250 LVLQKIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRRWSANHL 83
           LVL+K FQNT+D +  KLA  WEGPY I +  G G Y   D +   +PR W+A HL
Sbjct: 42  LVLRKTFQNTKDPADGKLAPKWEGPYVINSKAGKGVYWLADMEGTLLPRSWNAIHL 97


>gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1329

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/61 (39%), Positives = 42/61 (68%)
 Frame = -2

Query: 250  LVLQKIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRRWSANHLKLYH 71
            LVL+++ QN  +  + KL  +WEGPY+IT+V+ NG YR  + + + + R W++ HLK ++
Sbjct: 1269 LVLRRVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSMHLKRFY 1328

Query: 70   L 68
            +
Sbjct: 1329 I 1329


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/60 (40%), Positives = 38/60 (63%)
 Frame = -2

Query: 250  LVLQKIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRRWSANHLKLYH 71
            LVL+K+F+NT + ++ KL A WEG YQ++ ++  G Y         +PR W++ HLK Y+
Sbjct: 1778 LVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837


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