BLASTX nr result

ID: Atractylodes21_contig00052470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052470
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605709.1| hypothetical protein MTR_4g037330 [Medicago ...   118   6e-25
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   100   9e-20
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    96   4e-18
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    94   9e-18
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    94   1e-17

>ref|XP_003605709.1| hypothetical protein MTR_4g037330 [Medicago truncatula]
           gi|355506764|gb|AES87906.1| hypothetical protein
           MTR_4g037330 [Medicago truncatula]
          Length = 638

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/112 (56%), Positives = 75/112 (66%)
 Frame = -2

Query: 341 RKPPALVRFSQGETRVEQVAAELMDRDEALKQLKHHLVXXXXXXXXXXXXXXXDGEFKVG 162
           R  P++V+F   ET+V  VA EL +RDEAL QLK HL+               D  F+VG
Sbjct: 465 RPAPSIVKFLTNETKVAAVALELKERDEALLQLKKHLLRAQEQMASYANKKRRDLSFEVG 524

Query: 161 EWVFLKLRPHRQQTVVRRINQKLAPRYYGPFLIIAKIGRVSYKLKFPETTKV 6
           EWVFLKLRPHRQQ++VRRINQKLA R+YGPF I  KIG V+Y LK P  +KV
Sbjct: 525 EWVFLKLRPHRQQSLVRRINQKLAARFYGPFQIEEKIGEVAYILKLPAESKV 576


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/113 (42%), Positives = 70/113 (61%)
 Frame = -2

Query: 341  RKPPALVRFSQGETRVEQVAAELMDRDEALKQLKHHLVXXXXXXXXXXXXXXXDGEFKVG 162
            R+PPA+VRF +G T    +   L +RD  L Q++ HL+               +  F VG
Sbjct: 2496 REPPAIVRFEEGSTNNYDLEMALRERDAMLVQIQQHLLRAQHLMKASADKHRRELSFAVG 2555

Query: 161  EWVFLKLRPHRQQTVVRRINQKLAPRYYGPFLIIAKIGRVSYKLKFPETTKVH 3
            +WV+LKL+P RQ TVVRR  QKLA +Y+GP+ I  +IG+V+Y+LK P+  ++H
Sbjct: 2556 DWVYLKLKPFRQHTVVRRYCQKLAAKYFGPYEISERIGKVAYRLKLPDEARIH 2608


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/113 (40%), Positives = 73/113 (64%)
 Frame = -2

Query: 341  RKPPALVRFSQGETRVEQVAAELMDRDEALKQLKHHLVXXXXXXXXXXXXXXXDGEFKVG 162
            R PP +VR  +G+T VE + A L DRD  +  L+ +LV               + EF+VG
Sbjct: 1395 RDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVG 1454

Query: 161  EWVFLKLRPHRQQTVVRRINQKLAPRYYGPFLIIAKIGRVSYKLKFPETTKVH 3
            + VFL+L+P+RQ+++ +R  +KLAPR+YGPF ++ +IG  +YKL+ P ++K+H
Sbjct: 1455 DAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIH 1507


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/111 (40%), Positives = 71/111 (63%)
 Frame = -2

Query: 335  PPALVRFSQGETRVEQVAAELMDRDEALKQLKHHLVXXXXXXXXXXXXXXXDGEFKVGEW 156
            PP  + +  GE++V  VA  L +R++ L  LK HL+               + EF++G++
Sbjct: 1308 PPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDY 1367

Query: 155  VFLKLRPHRQQTVVRRINQKLAPRYYGPFLIIAKIGRVSYKLKFPETTKVH 3
            V++KL+P+RQQ+VV R NQKL+P+Y+GP+ II + G V+YKL  P  ++VH
Sbjct: 1368 VYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVH 1418


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/113 (38%), Positives = 70/113 (61%)
 Frame = -2

Query: 341  RKPPALVRFSQGETRVEQVAAELMDRDEALKQLKHHLVXXXXXXXXXXXXXXXDGEFKVG 162
            R PP L R+ +  T V  +  +L+ RD  L +LK HLV               +  F VG
Sbjct: 1164 RPPPPLYRYKRNSTAVAALEDQLLVRDAVLDELKLHLVTAQNNMRTQEDKHRREMHFGVG 1223

Query: 161  EWVFLKLRPHRQQTVVRRINQKLAPRYYGPFLIIAKIGRVSYKLKFPETTKVH 3
            + V+L+L+P++Q+++ +R+N+KLAPRYYGPF ++ +IG V+Y+L  P  +K+H
Sbjct: 1224 DMVYLRLQPYKQRSLAKRLNEKLAPRYYGPFPVLKRIGTVAYELDLPPHSKIH 1276


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