BLASTX nr result

ID: Atractylodes21_contig00052411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052411
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ...    79   3e-13
gb|ACL53100.1| unknown [Zea mays]                                      79   4e-13
gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| T...    79   4e-13
ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea ma...    79   4e-13

>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/75 (61%), Positives = 59/75 (78%)
 Frame = -1

Query: 226 SLQPDIYTYTAVMNGFCKVGRSXXXXXXXXXAIEMGLTPSTVTYNTIFNGYFKEGRPKEG 47
           +++PDIYTYTA+M+GFCKVGRS         A+EMGL P+ VT+NT+ +GY KEGRP +G
Sbjct: 276 TVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKG 335

Query: 46  FGLLKQMKERNCMPD 2
           FG+LK MK+R CMPD
Sbjct: 336 FGVLKLMKQRKCMPD 350


>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498638|gb|AES79841.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/71 (50%), Positives = 46/71 (64%)
 Frame = -1

Query: 214 DIYTYTAVMNGFCKVGRSXXXXXXXXXAIEMGLTPSTVTYNTIFNGYFKEGRPKEGFGLL 35
           D+Y+Y+AVMNG CKVGRS         A+ +GL P  VT+N +  GY +EGR  EG G+L
Sbjct: 250 DVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVL 309

Query: 34  KQMKERNCMPD 2
           K MKE  C+ D
Sbjct: 310 KMMKEHGCVAD 320


>gb|ACL53100.1| unknown [Zea mays]
          Length = 437

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
 Frame = -1

Query: 223 LQPDIYTYTAVMNGFCKVGRSXXXXXXXXXAIEMGLTPSTVTYNTIFNGYFKEGRPKEGF 44
           L PDIYT+T V++GFCKVGR+         AI MGL+P+T TYN + NG+ KEG P + F
Sbjct: 157 LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAF 216

Query: 43  GLLKQMKERN---CMPD 2
            LL +M   N   C+PD
Sbjct: 217 ALLMEMCGNNDAACLPD 233


>gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| TPA: hypothetical
           protein ZEAMMB73_414823 [Zea mays]
          Length = 559

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
 Frame = -1

Query: 223 LQPDIYTYTAVMNGFCKVGRSXXXXXXXXXAIEMGLTPSTVTYNTIFNGYFKEGRPKEGF 44
           L PDIYT+T V++GFCKVGR+         AI MGL+P+T TYN + NG+ KEG P + F
Sbjct: 279 LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAF 338

Query: 43  GLLKQMKERN---CMPD 2
            LL +M   N   C+PD
Sbjct: 339 ALLMEMCGNNDAACLPD 355


>ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea mays]
           gi|194689480|gb|ACF78824.1| unknown [Zea mays]
          Length = 558

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
 Frame = -1

Query: 223 LQPDIYTYTAVMNGFCKVGRSXXXXXXXXXAIEMGLTPSTVTYNTIFNGYFKEGRPKEGF 44
           L PDIYT+T V++GFCKVGR+         AI MGL+P+T TYN + NG+ KEG P + F
Sbjct: 278 LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAF 337

Query: 43  GLLKQMKERN---CMPD 2
            LL +M   N   C+PD
Sbjct: 338 ALLMEMCGNNDAACLPD 354


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