BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052398
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    81   2e-17
gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    84   8e-16
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    85   7e-15
dbj|BAB11636.1| unnamed protein product [Arabidopsis thaliana]         72   3e-13
ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana] ...    69   6e-12

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 81.3 bits (199), Expect(2) = 2e-17
 Identities = 40/88 (45%), Positives = 57/88 (64%)
 Frame = -3

Query: 300 YCQKIKVLSDLLANIDAPVLEKTLVTHLINGLSPDYDPIATIIRHRTPLPTFLQARSMLL 121
           YC+K+K L+DLLANID PV ++ LV H++NGLS  +D I  +I+H++P  +FL+ RSML 
Sbjct: 135 YCKKMKNLADLLANIDFPVTDRALVMHMLNGLSDKFDSIINVIKHKSPFLSFLETRSMLQ 194

Query: 120 LGEQRHLRHRLPNXXXXXXXXXPTILHT 37
           L E R  +   P+          TIL+T
Sbjct: 195 LEEDRLSKQIKPSDVHHDTSSSSTILYT 222



 Score = 32.7 bits (73), Expect(2) = 2e-17
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -1

Query: 377 DKKDVRAIDLDNELRNIVLGDL 312
           D K+ RA+ L+NELR +V+GDL
Sbjct: 109 DNKEARALQLENELRTMVIGDL 130


>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 84.3 bits (207), Expect(2) = 8e-16
 Identities = 38/65 (58%), Positives = 51/65 (78%)
 Frame = -3

Query: 300 YCQKIKVLSDLLANIDAPVLEKTLVTHLINGLSPDYDPIATIIRHRTPLPTFLQARSMLL 121
           YCQK+K LSDLLAN+D+PV ++ +VTH++NGLS  +D I  II+HR P P+F  ARSML+
Sbjct: 64  YCQKLKTLSDLLANVDSPVSDRVVVTHMLNGLSEKFDNIINIIKHRQPFPSFSVARSMLI 123

Query: 120 LGEQR 106
             E+R
Sbjct: 124 EEERR 128



 Score = 23.9 bits (50), Expect(2) = 8e-16
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 350 LDNELRNIVLGDL 312
           LDN+LR++ LGDL
Sbjct: 47  LDNDLRSLTLGDL 59


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/65 (55%), Positives = 51/65 (78%)
 Frame = -3

Query: 300 YCQKIKVLSDLLANIDAPVLEKTLVTHLINGLSPDYDPIATIIRHRTPLPTFLQARSMLL 121
           YCQK+K LSDLL N+D+P+ ++ LV HL+NGL+  YD I  +I+H++P P+F +ARSMLL
Sbjct: 136 YCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLL 195

Query: 120 LGEQR 106
           + E R
Sbjct: 196 MEESR 200


>dbj|BAB11636.1| unnamed protein product [Arabidopsis thaliana]
          Length = 175

 Score = 72.4 bits (176), Expect(2) = 3e-13
 Identities = 35/76 (46%), Positives = 51/76 (67%)
 Frame = -3

Query: 321 G*SPIS*YCQKIKVLSDLLANIDAPVLEKTLVTHLINGLSPDYDPIATIIRHRTPLPTFL 142
           G   I  YCQK+K +SD+LAN+DAPV E+ LV +++NGL+ ++D    II+H+ P  +F 
Sbjct: 95  GDQSIQAYCQKLKSISDMLANVDAPVSERNLVMYMLNGLNEEFDNRINIIKHKDPFLSFE 154

Query: 141 QARSMLLLGEQRHLRH 94
            A+SML   E R  +H
Sbjct: 155 TAKSMLQSEETRLKKH 170



 Score = 27.3 bits (59), Expect(2) = 3e-13
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 377 DKKDVRAIDLDNELRNIVLGD 315
           + K+ RAI LDNELR   +GD
Sbjct: 76  NNKEARAIQLDNELRLTEIGD 96


>ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10086469|gb|AAG12529.1|AC015446_10 Hypothetical
           Protein [Arabidopsis thaliana]
           gi|332193548|gb|AEE31669.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 308

 Score = 68.9 bits (167), Expect(2) = 6e-12
 Identities = 35/93 (37%), Positives = 52/93 (55%)
 Frame = -3

Query: 300 YCQKIKVLSDLLANIDAPVLEKTLVTHLINGLSPDYDPIATIIRHRTPLPTFLQARSMLL 121
           Y +K+K L+D L N+D PV ++ LV +++NGL+P +D I  +I+HR P P+F  A +ML 
Sbjct: 134 YYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQ 193

Query: 120 LGEQRHLRHRLPNXXXXXXXXXPTILHTANGSP 22
             E R  R   PN          T+L  +   P
Sbjct: 194 EEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPP 226



 Score = 26.2 bits (56), Expect(2) = 6e-12
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 377 DKKDVRAIDLDNELRNIVLGDL 312
           + KD RA+ LD+ELR   +GD+
Sbjct: 108 NNKDARALRLDSELRTKDIGDM 129