BLASTX nr result

ID: Atractylodes21_contig00052370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052370
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   110   2e-22
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   102   3e-20
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    94   9e-18
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    85   5e-15
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    78   7e-13

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/123 (44%), Positives = 74/123 (60%)
 Frame = -2

Query: 370 VKATLSELQSGIHQQIESQMALMTQAIRDEVQSILADGMNPFADPRSRASPRNSGTGPSN 191
           V   +  LQ  +  QI   +   TQ +R+EV  I   G     + R        G G   
Sbjct: 32  VGKAVETLQETLATQIAVSLERATQQLREEVAKIQERGDERRDERRENDDGEGEGFGGGF 91

Query: 190 IQPNGGNTWRFRKLDMPLFDGTNPDGWILRAERYFTFYRLVEEDKLEAAVVALEGDALLW 11
               GG +WR +KLD+P+F G NPDGWI+RAER+F FYRL E++K+EAAVV+L+G+ALLW
Sbjct: 92  ---RGGGSWRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLW 148

Query: 10  FQW 2
           +QW
Sbjct: 149 YQW 151


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  102 bits (254), Expect = 3e-20
 Identities = 55/132 (41%), Positives = 77/132 (58%), Gaps = 16/132 (12%)
 Frame = -2

Query: 349 LQSGIHQQIESQMALMTQAIRDEVQSILADGMNPFADPRSRASPRNSGTGPSNIQPN--- 179
           +Q  +  QI   +   T+ I +++   LA+ ++  A+ R  AS R S     + +     
Sbjct: 1   MQQTLATQIADSLEKTTKKIGEDMAK-LAERIDSSAESRREASERGSPDERRDWEEREGF 59

Query: 178 -------------GGNTWRFRKLDMPLFDGTNPDGWILRAERYFTFYRLVEEDKLEAAVV 38
                        GG  W+ ++LD+P+F GTNPDGWILR ERYF FYRL  E++LEAAVV
Sbjct: 60  VRGDGDGYEGGFRGGGGWKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVV 119

Query: 37  ALEGDALLWFQW 2
           AL+G+ALLWFQW
Sbjct: 120 ALDGEALLWFQW 131


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 39/58 (67%), Positives = 47/58 (81%)
 Frame = -2

Query: 175 GNTWRFRKLDMPLFDGTNPDGWILRAERYFTFYRLVEEDKLEAAVVALEGDALLWFQW 2
           G  WR +KLDMP FD T+PDGWILR ER+F FY L + +K+EAAVVA+EGDAL W+QW
Sbjct: 169 GGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQW 226


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 PRNSGTGPSNIQPNGGNTWR-FRKLDMPLFDGTNPDGWILRAERYFTFYRLVEEDKLEAA 44
           P   G     ++  G   WR  R+++MP+F G NPDGWI RA+RYF  Y L EE+KL AA
Sbjct: 749 PSGGGMASDEMRRGGNGEWRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAA 808

Query: 43  VVALEGDALLWFQW 2
            ++L+GDAL W+QW
Sbjct: 809 AMSLDGDALSWYQW 822


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
 Frame = -2

Query: 364 ATLSELQSGIH----QQIESQMALMTQAIRDEVQSILADGMNPFADPRSRASPRNSGTGP 197
           AT+  +Q   H    ++  S+M      + D V+ +L  G+           P     GP
Sbjct: 39  ATMQSVQDVSHIVNLEETISEMKGSLLNLDDGVKELLQQGITSAVGATMEKPP--GAAGP 96

Query: 196 SNIQPNGGNTWRFRKLDMPLFDGTNPDGWILRAERYFTFYRLVEEDKLEAAVVALEGDAL 17
           + I       W  RKL +P+F+G NPDGWI RAERYF    +   D+L+AA V LEGDAL
Sbjct: 97  TYIP---APLWP-RKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDAL 152

Query: 16  LWFQW 2
            WFQW
Sbjct: 153 AWFQW 157


Top