BLASTX nr result

ID: Atractylodes21_contig00052368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052368
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398311.1| ribosomal protein S16 [Lactuca sativa] gi|12223...   149   2e-34
gb|ABD47215.1| ribosomal protein S16 [Lactuca sativa]                 143   1e-32
ref|YP_004376403.1| ribosomal protein S16 [Olea europaea subsp. ...   143   2e-32
ref|YP_004564354.1| ribosomal protein S16 (chloroplast) [Agerati...   142   4e-32
gb|ADD30030.1| ribosomal protein S16 [Ilex cornuta]                   142   4e-32

>ref|YP_398311.1| ribosomal protein S16 [Lactuca sativa]
           gi|122239160|sp|Q332Z6.1|RR16_LACSA RecName: Full=30S
           ribosomal protein S16, chloroplastic
           gi|78675150|dbj|BAE47576.1| ribosomal protein S16
           [Lactuca sativa]
          Length = 88

 Score =  149 bits (377), Expect = 2e-34
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -2

Query: 235 Q*AVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK 56
           Q AVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK
Sbjct: 13  QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK 72

Query: 55  KAEVFKELCPNQTKLN 8
           KAEVFKELCPNQTK N
Sbjct: 73  KAEVFKELCPNQTKFN 88


>gb|ABD47215.1| ribosomal protein S16 [Lactuca sativa]
          Length = 84

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = -2

Query: 220 RIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVF 41
           RIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVF
Sbjct: 14  RIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVF 73

Query: 40  KELCPNQTKLN 8
           KELCPNQTK N
Sbjct: 74  KELCPNQTKFN 84


>ref|YP_004376403.1| ribosomal protein S16 [Olea europaea subsp. europaea]
           gi|334700264|ref|YP_004563763.1| ribosomal protein S16
           [Olea europaea subsp. cuspidata]
           gi|334701601|ref|YP_004563986.1| ribosomal protein S16
           [Olea woodiana subsp. woodiana]
           gi|334701870|ref|YP_004564479.1| ribosomal protein S16
           [Olea europaea subsp. maroccana]
           gi|365823314|ref|YP_003359341.2| ribosomal protein S16
           (chloroplast) [Olea europaea]
           gi|291059235|gb|ADD72071.1| ribosomal protein S16 [Olea
           europaea] gi|328795415|emb|CBR30294.1| ribosomal protein
           S16 [Olea europaea subsp. europaea]
           gi|334084383|emb|CBR23809.1| ribosomal protein S16 [Olea
           europaea subsp. cuspidata] gi|334084469|emb|CBR24602.1|
           ribosomal protein S16 [Olea europaea subsp. europaea]
           gi|334084555|emb|CBR30387.1| ribosomal protein S16 [Olea
           europaea subsp. europaea] gi|334084641|emb|CBS29331.1|
           ribosomal protein S16 [Olea woodiana subsp. woodiana]
           gi|334084846|emb|CBS29216.1| ribosomal protein S16 [Olea
           europaea subsp. maroccana] gi|334084932|emb|CBJ04280.1|
           ribosomal protein S16 [Olea europaea subsp. cuspidata]
           gi|334085018|emb|CBR23718.1| ribosomal protein S16 [Olea
           europaea subsp. cuspidata] gi|363413079|gb|ADA69908.2|
           ribosomal protein S16 (chloroplast) [Olea europaea]
          Length = 88

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/76 (93%), Positives = 73/76 (96%)
 Frame = -2

Query: 235 Q*AVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK 56
           Q AVYRIVAIDVRSRREG+DLRKVGFYDP+KNQTYLNVPAILYFLEKGAQPTGTVQDILK
Sbjct: 13  QRAVYRIVAIDVRSRREGKDLRKVGFYDPLKNQTYLNVPAILYFLEKGAQPTGTVQDILK 72

Query: 55  KAEVFKELCPNQTKLN 8
           KAEVFKEL PNQTK N
Sbjct: 73  KAEVFKELRPNQTKFN 88


>ref|YP_004564354.1| ribosomal protein S16 (chloroplast) [Ageratina adenophora]
           gi|334089655|gb|AEG64538.1| ribosomal protein S16
           (chloroplast) [Ageratina adenophora]
          Length = 84

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = -2

Query: 220 RIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVF 41
           RIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVF
Sbjct: 14  RIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAEVF 73

Query: 40  KELCPNQTKLN 8
           KELCPN+TK N
Sbjct: 74  KELCPNKTKFN 84


>gb|ADD30030.1| ribosomal protein S16 [Ilex cornuta]
          Length = 88

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = -2

Query: 235 Q*AVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK 56
           Q AVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK
Sbjct: 13  QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK 72

Query: 55  KAEVFKELCPNQTKLN 8
           KAEVFKEL  NQTK N
Sbjct: 73  KAEVFKELRSNQTKFN 88


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