BLASTX nr result

ID: Atractylodes21_contig00052319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052319
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    67   2e-09
ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820...    62   4e-08
gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsi...    62   4e-08
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    62   5e-08
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    62   6e-08

>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/75 (44%), Positives = 45/75 (60%)
 Frame = +1

Query: 7   HRHKLQSRADPHIFLGYPFDKKAYKVMHLVTKQVSFSRNVEFCETEFPFTKPTTLSDIFD 186
           HR KL  RA P +FLGYPF +K YKV++L T QV  SR+V+F E+ FPF+    +S +F 
Sbjct: 253 HRDKLMPRAIPGVFLGYPFAQKGYKVLNLQTSQVIVSRDVKFFESIFPFSYSLPMSKLFP 312

Query: 187 IPLPDPNLSQQESQE 231
              P       +S +
Sbjct: 313 ASFPTTEEHSPDSSQ 327


>ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max]
          Length = 1057

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
 Frame = +1

Query: 10  RHKLQSRADPHIFLGYPFDKKAYKVMHLVTKQVSFSRNVEFCETEFPFTKPTTLSDIFDI 189
           RHK   RA    FLGYP   K YK+++L TKQ+  SR+V+F E  FPF    + +   ++
Sbjct: 326 RHKFSPRAVAASFLGYPQGYKGYKLLNLSTKQIFISRDVKFFENIFPFKNQQSNNSDREL 385

Query: 190 --PLPDPNL----SQQESQESPISDNIDEHVPIPSDFSQSVPISQNIPI 318
             P   PNL    +  ++  S I+D + +H P P+    +  I  +IPI
Sbjct: 386 LDPYVTPNLITSTNLDDTDISSITDTL-QHTPQPAQLDPATTIQPDIPI 433


>gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1015

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
 Frame = +1

Query: 7   HRHKLQSRADPHIFLGYPFDKKAYKVMHLVTKQVSFSRNVEFCETEFPFTKPTT---LSD 177
           +RHK Q RA   IFLGYP   K YK++ L TK +  SRNV F ET FPF+   +    SD
Sbjct: 457 NRHKFQPRAKACIFLGYPSGYKGYKLLDLETKSIHISRNVVFHETRFPFSSGDSAGPFSD 516

Query: 178 IFDIPLPDPNLSQQESQESPISDNIDEHVPIPSDFSQSVPISQNIPIHSEP 330
           IF         S  ES     ++ +D ++P+         +    PI SEP
Sbjct: 517 IFG--------SINESLIENDTEIVDSNIPV---------VVSEAPILSEP 550


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/110 (35%), Positives = 61/110 (55%)
 Frame = +1

Query: 16   KLQSRADPHIFLGYPFDKKAYKVMHLVTKQVSFSRNVEFCETEFPFTKPTTLSDIFDIPL 195
            K  SR+   +FLGYPF KK +K+  L TK++  SR+V+F E  FPF  P  ++ I D  +
Sbjct: 752  KFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAVNIILDNIV 811

Query: 196  PDPNLSQQESQESPISDNIDEHVPIPSDFSQSVPISQNIPIHSEPQSQNH 345
            P  N+      +S  +D +D+   +P+  +Q    +QN P   +P+ Q H
Sbjct: 812  PTVNV----EIDSDFADFVDDDADLPNPQAQ----TQN-PNLIQPEPQAH 852


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/96 (39%), Positives = 53/96 (55%)
 Frame = +1

Query: 16  KLQSRADPHIFLGYPFDKKAYKVMHLVTKQVSFSRNVEFCETEFPFTKPTTLSDIFDIPL 195
           K +SR++  IFLGYPF KK ++V +  T  +S SR+V F ETEFPF      + +FD   
Sbjct: 708 KFESRSNKSIFLGYPFAKKGWRVYNFETGVISVSRDVVFRETEFPFP-----ASVFD--- 759

Query: 196 PDPNLSQQESQESPISDNIDEHVPIPSDFSQSVPIS 303
                S  +SQ SP   N D+   +PS+     P+S
Sbjct: 760 -----STPDSQLSP--SNADQSFFLPSELQAPTPVS 788


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