BLASTX nr result

ID: Atractylodes21_contig00052280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052280
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73042.1| polyprotein [Ananas comosus]                          111   5e-23
emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera]   109   3e-22
emb|CAJ65807.1| polyprotein [Citrus sinensis]                         108   6e-22
gb|AAP43916.1| integrase [Gossypium herbaceum]                        107   1e-21
emb|CAN64875.1| hypothetical protein VITISV_019676 [Vitis vinifera]   105   4e-21

>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/78 (66%), Positives = 63/78 (80%)
 Frame = -1

Query: 362 VEKCLTCLQVKTEYQK*SGKLQQPDIPVWKWERITMDFVTKLPGTLKGHDAIWVVVDRLT 183
           V KCLTC QVK E++  +GKLQ   IPVWKWE+ITMDFVT LP +  GHDAIWV+VDRLT
Sbjct: 566 VAKCLTCQQVKAEHRVPAGKLQSLPIPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLT 625

Query: 182 KSAHFLPIKESYSLEKLA 129
           KSAHF+PI  +++ E+LA
Sbjct: 626 KSAHFIPIHTTWTGERLA 643


>emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera]
          Length = 374

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
 Frame = -1

Query: 362 VEKCLTCLQVKTEYQK*SGKLQQPDIPVWKWERITMDFVTKLPGTLKGHDAIWVVVDRLT 183
           V +CL C QVK E+Q+ +G LQ   IP WKWE ITMDFV  LP TL G++AIWV+VDRLT
Sbjct: 9   VAQCLVCQQVKAEHQRPAGSLQPLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLT 68

Query: 182 KSAHFLPIKESYSLEKLA---VGESFWFKGSRPARYKPHPPRSNSRF 51
           KSAHFLP+K ++SL++LA   V E     G   +      PR  SRF
Sbjct: 69  KSAHFLPMKVNFSLDRLASLYVKEIVRMHGVPVSIVSDRDPRFTSRF 115


>emb|CAJ65807.1| polyprotein [Citrus sinensis]
          Length = 533

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/111 (49%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
 Frame = -1

Query: 362 VEKCLTCLQVKTEYQK*SGKLQQPDIPVWKWERITMDFVTKLPGTLKGHDAIWVVVDRLT 183
           V +CL C Q+K E+Q+ +G  Q   IP WKWE ITMDFVT LP T  GHD +WVVVDRLT
Sbjct: 399 VSRCLVCQQIKAEHQRPAGFSQPLPIPEWKWEHITMDFVTGLPRTQSGHDGVWVVVDRLT 458

Query: 182 KSAHFLPIKESYSLEKLA---VGESFWFKGSRPARYKPHPPRSNSRFCVSV 39
           KS HFLP K +YS++KL    V E     G+  +       R  S+F  S+
Sbjct: 459 KSTHFLPFKTTYSMDKLGNIFVAEIVRLHGAPVSIVSDRDSRFTSKFWTSL 509


>gb|AAP43916.1| integrase [Gossypium herbaceum]
          Length = 353

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/107 (51%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
 Frame = -1

Query: 362 VEKCLTCLQVKTEYQK*SGKLQQPDIPVWKWERITMDFVTKLPGTLKGHDAIWVVVDRLT 183
           V KCLTC QVK E+Q  SG LQ   IP+WKWER+TMDF + LP T    D++WV+VDRLT
Sbjct: 223 VGKCLTCQQVKAEHQLPSGLLQPVKIPLWKWERVTMDFASGLPLTPSKKDSVWVIVDRLT 282

Query: 182 KSAHFLPIKESYSLEKLA---VGESFWFKGSRPARYKPHPPRSNSRF 51
           KSAHF+P++  +SL++LA   V E     G   +      PR  SRF
Sbjct: 283 KSAHFIPVRTDFSLQQLAKLYVAEIVRLHGVPVSIISDRDPRFTSRF 329


>emb|CAN64875.1| hypothetical protein VITISV_019676 [Vitis vinifera]
          Length = 386

 Score =  105 bits (262), Expect = 4e-21
 Identities = 57/107 (53%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
 Frame = -1

Query: 362 VEKCLTCLQVKTEYQK*SGKLQQPDIPVWKWERITMDFVTKLPGTLKGHDAIWVVVDRLT 183
           V  CL C QVK E+Q+  G LQ   IP WKWE ITMDFV  LP TL G++AIWV+VDRLT
Sbjct: 9   VAHCLVCQQVKVEHQRPVGSLQPLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLT 68

Query: 182 KSAHFLPIKESYSLEKLA---VGESFWFKGSRPARYKPHPPRSNSRF 51
           KSAHFLP+K ++SL++LA   V E     G   +      P   SRF
Sbjct: 69  KSAHFLPMKVNFSLDRLASLHVKEIVRMHGVPVSIVSDRDPHFTSRF 115


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