BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052228
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   154   7e-36
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...   140   1e-31
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...   140   1e-31
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   138   4e-31
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   138   5e-31

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/113 (65%), Positives = 88/113 (77%)
 Frame = +3

Query: 12  GRVESEKVQGPACPAEIQQVVDRFAGVFEWPQGLPPEREKEHAIHLKEGVGPVNVRPYRY 191
           G +   KV+    P  +Q+++ RF GVFE P GLPP R  EHAI LKEG  PV VRPYRY
Sbjct: 641 GSIRDSKVE-QEIPPFLQELMRRFEGVFETPVGLPPRRGHEHAIVLKEGSNPVGVRPYRY 699

Query: 192 PQYQKDEIEKMVREMADAGIIQTSQSPFSSPVLLVKKKDGSWRFCIDYRALNR 350
           PQ+QKDEIE++++EM  AGIIQ S SPFSSPV+LVKKKDGSWRFC+DYRALN+
Sbjct: 700 PQFQKDEIERLIKEMLAAGIIQPSTSPFSSPVILVKKKDGSWRFCVDYRALNK 752


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/117 (56%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +3

Query: 9   FGRVESEKVQGPACP---AEIQQVVDRFAGVFEWPQGLPPEREKEHAIHLKEGVGPVNVR 179
           FG++  +   G   P    E++ ++D F  +F+ PQGLPP R++EHAIHL  G GPVNVR
Sbjct: 276 FGQLHCDVQPGMVTPNQQLEMKSLLDNFDNIFKEPQGLPPGRQQEHAIHLLHGQGPVNVR 335

Query: 180 PYRYPQYQKDEIEKMVREMADAGIIQTSQSPFSSPVLLVKKKDGSWRFCIDYRALNR 350
           PYRYP + K EIEK V+E+  +G+I+ SQS FSSPV+LVKKKD SWR C+DYRALN+
Sbjct: 336 PYRYPHHHKTEIEKQVKELLLSGVIRPSQSAFSSPVILVKKKDDSWRMCVDYRALNK 392


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/117 (56%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +3

Query: 9   FGRVESEKVQGPACP---AEIQQVVDRFAGVFEWPQGLPPEREKEHAIHLKEGVGPVNVR 179
           FG++  +   G   P    E++ ++D F  +F+ PQGLPP R++EHAIHL  G GPVNVR
Sbjct: 276 FGQLHCDVQPGMVTPNQQLEMKSLLDNFDNIFKEPQGLPPGRQQEHAIHLLHGQGPVNVR 335

Query: 180 PYRYPQYQKDEIEKMVREMADAGIIQTSQSPFSSPVLLVKKKDGSWRFCIDYRALNR 350
           PYRYP + K EIEK V+E+  +G+I+ SQS FSSPV+LVKKKD SWR C+DYRALN+
Sbjct: 336 PYRYPHHHKTEIEKQVKELLLSGVIRPSQSAFSSPVILVKKKDDSWRMCVDYRALNK 392


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/98 (65%), Positives = 79/98 (80%)
 Frame = +3

Query: 57  EIQQVVDRFAGVFEWPQGLPPEREKEHAIHLKEGVGPVNVRPYRYPQYQKDEIEKMVREM 236
           E++ +++ + GVF+ P GLPP+R+KEH I LKEG G VNVRPYRYP + K+EIEK VREM
Sbjct: 346 ELELLLENYGGVFQEPTGLPPKRKKEHVITLKEGEGAVNVRPYRYPHHHKNEIEKQVREM 405

Query: 237 ADAGIIQTSQSPFSSPVLLVKKKDGSWRFCIDYRALNR 350
             AGII+ S S FSSPV+LVK+KD SWR CIDYRALN+
Sbjct: 406 LQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRALNK 443


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/96 (67%), Positives = 80/96 (83%)
 Frame = +3

Query: 60  IQQVVDRFAGVFEWPQGLPPEREKEHAIHLKEGVGPVNVRPYRYPQYQKDEIEKMVREMA 239
           IQ+++D++ GVF+ PQ LPP R +EHAI L+EG  PVN+RPYRY   QK+EIEK+VREM 
Sbjct: 680 IQRLLDQYQGVFQTPQLLPPVRNREHAITLQEGSSPVNIRPYRYSFAQKNEIEKLVREML 739

Query: 240 DAGIIQTSQSPFSSPVLLVKKKDGSWRFCIDYRALN 347
           +A II+ S SP+SSPVLLVKKKDG WRFC+DYRALN
Sbjct: 740 NAQIIRPSVSPYSSPVLLVKKKDGGWRFCVDYRALN 775