BLASTX nr result

ID: Atractylodes21_contig00052226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052226
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    81   8e-14
ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220...    80   2e-13
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    75   4e-12
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    74   9e-12
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    73   2e-11

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/86 (44%), Positives = 61/86 (70%)
 Frame = -1

Query: 263  DDETAGFEDSDSEGANLKGERTVGVSLNSVVGFSAPKTMKMEGLVGEQQVVVLIDSGATH 84
            +D+    + +  E A ++ +  V +SLNSVVG + P TMK++G +G ++V++L+DSGATH
Sbjct: 1021 EDDNQFDDRATEEPALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATH 1080

Query: 83   NFLSAQLVERLHIPVRPTGSYNISMG 6
            NFLS +LV++L +P+  T SY + MG
Sbjct: 1081 NFLSLELVQQLTLPLTTTTSYGVMMG 1106


>ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
          Length = 2047

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/87 (41%), Positives = 60/87 (68%)
 Frame = -1

Query: 263 DDETAGFEDSDSEGANLKGERTVGVSLNSVVGFSAPKTMKMEGLVGEQQVVVLIDSGATH 84
           D E    ED ++E A ++    V +SLNSVVG +AP T K++G V ++++++++D GATH
Sbjct: 727 DLEDTKMEDVENENAMVEVSPVVELSLNSVVGLTAPSTFKVKGTVEDREIIIMVDCGATH 786

Query: 83  NFLSAQLVERLHIPVRPTGSYNISMGA 3
           NF+S   VE+L +P+  T +Y++ MG+
Sbjct: 787 NFISLMRVEKLKLPMAETTNYDVIMGS 813


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = -1

Query: 191 VSLNSVVGFSAPKTMKMEGLVGEQQVVVLIDSGATHNFLSAQLVERLHIPVRPTGSYNIS 12
           VSLNSV+G S PKTMK+ GL+   +VVV+ID GATHNFLS + +++L IPV  +  + +S
Sbjct: 469 VSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVS 528

Query: 11  MG 6
           +G
Sbjct: 529 LG 530


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/62 (51%), Positives = 47/62 (75%)
 Frame = -1

Query: 191 VSLNSVVGFSAPKTMKMEGLVGEQQVVVLIDSGATHNFLSAQLVERLHIPVRPTGSYNIS 12
           +SLNSV+G S+PKT+KMEG +  Q+V+V++D GATHNF+S   V RL IP+  +  + +S
Sbjct: 406 ISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVS 465

Query: 11  MG 6
           +G
Sbjct: 466 LG 467


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/79 (43%), Positives = 55/79 (69%)
 Frame = -1

Query: 239 DSDSEGANLKGERTVGVSLNSVVGFSAPKTMKMEGLVGEQQVVVLIDSGATHNFLSAQLV 60
           DS  EG  ++    V +SLN VVG +AP T K++G V ++++V+++D GATHNF+S +LV
Sbjct: 329 DSTHEGEMVEVSPMVELSLNFVVGLTAPGTFKIKGRVEDREIVIMVDCGATHNFISLKLV 388

Query: 59  ERLHIPVRPTGSYNISMGA 3
           E L++P+    +Y + MG+
Sbjct: 389 ESLNLPMAAITNYGVIMGS 407


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