BLASTX nr result

ID: Atractylodes21_contig00052165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052165
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                59   4e-07
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    59   4e-07
gb|ACN78497.1| putative reverse transcriptase [Arachis hypogaea]       57   2e-06
gb|AAT38756.2| Putative methyltransferase family protein [Solanu...    56   3e-06

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = +1

Query: 1   EMKMLRWIYGRTILDKILSEVFRTKLQVASITNKLKHDKLQWFGNNKRR 147
           EM+MLRW+ G T  DKI +EV R K+ VAS+ +KL+  +L+WFG+ KRR
Sbjct: 583 EMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRR 631


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = +1

Query: 1   EMKMLRWIYGRTILDKILSEVFRTKLQVASITNKLKHDKLQWFGNNKRR 147
           EM+MLRW+ G T  DKI +EV R K+ VAS+ +KL+  +L+WFG+ KRR
Sbjct: 115 EMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRR 163


>gb|ACN78497.1| putative reverse transcriptase [Arachis hypogaea]
          Length = 515

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +1

Query: 1   EMKMLRWIYGRTILDKILSEVFRTKLQVASITNKLKHDKLQWFGNNKRR---HI*DGTGE 171
           EMKMLRW+ GR  LDKI +E  R ++ VASI  K+    L WFG+ +RR   H+     E
Sbjct: 123 EMKMLRWMSGRMQLDKIRNEDIRERVGVASIVKKMVESHLWWFGHVRRRPTKHLVRRVDE 182

Query: 172 VLDGRG 189
           + DG+G
Sbjct: 183 MEDGQG 188


>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
          Length = 828

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = +1

Query: 4   MKMLRWIYGRTILDKILSEVFRTKLQVASITNKLKHDKLQWFGNNKRR 147
           M MLRW+ G T  DKI +EV R K+ VAS+ +KL+  +L+WFG+ KRR
Sbjct: 1   MSMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRR 48


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