BLASTX nr result

ID: Atractylodes21_contig00052163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052163
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...   108   6e-22
ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
emb|CBI37821.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002280762.1| PREDICTED: DDB1- and CUL4-associated factor ...   105   5e-21
ref|XP_002306202.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20

>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 482

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/82 (65%), Positives = 60/82 (73%)
 Frame = +3

Query: 24  MKKRNRASVDTAVVDICRREVGHLSTRKFAHRLAASXXXXXXXXXXXXXXXHRGCVNTVS 203
           MKKR R + D AV+++ +REVG LSTR FAHRLAAS               HRGCVNTVS
Sbjct: 1   MKKRARTNPDKAVLNVWQREVGELSTRNFAHRLAASEDLVLRLDLYKKLDKHRGCVNTVS 60

Query: 204 FNADGDILVSGSDDRRVILWDW 269
           FNA+GDILVSGSDDRRVILWDW
Sbjct: 61  FNANGDILVSGSDDRRVILWDW 82


>ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|222849348|gb|EEE86895.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/83 (60%), Positives = 60/83 (72%)
 Frame = +3

Query: 21  MMKKRNRASVDTAVVDICRREVGHLSTRKFAHRLAASXXXXXXXXXXXXXXXHRGCVNTV 200
           MMKKR+R  +D AVV++C+RE+G LSTR FAHRLAAS               H GCVNT+
Sbjct: 1   MMKKRSRTDLDQAVVNVCKRELGQLSTRDFAHRLAASEDLVLRLEIHKKLEKHEGCVNTL 60

Query: 201 SFNADGDILVSGSDDRRVILWDW 269
           SFN+ GD+L+SGSDD RVILWDW
Sbjct: 61  SFNSGGDVLISGSDDLRVILWDW 83


>emb|CBI37821.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/87 (59%), Positives = 60/87 (68%)
 Frame = +3

Query: 9   STSRMMKKRNRASVDTAVVDICRREVGHLSTRKFAHRLAASXXXXXXXXXXXXXXXHRGC 188
           S   M ++R+  S+D AVVD+ +REVG L  R FAHRLAAS               HRGC
Sbjct: 11  SKQTMSRRRSTTSLDRAVVDVWQREVGGLPNRSFAHRLAASKDLVLQFDIYRKLEKHRGC 70

Query: 189 VNTVSFNADGDILVSGSDDRRVILWDW 269
           VNTVSFNADG+ILVSGSDDRR+ILWDW
Sbjct: 71  VNTVSFNADGEILVSGSDDRRIILWDW 97


>ref|XP_002280762.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Vitis vinifera]
          Length = 493

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/83 (61%), Positives = 59/83 (71%)
 Frame = +3

Query: 21  MMKKRNRASVDTAVVDICRREVGHLSTRKFAHRLAASXXXXXXXXXXXXXXXHRGCVNTV 200
           M ++R+  S+D AVVD+ +REVG L  R FAHRLAAS               HRGCVNTV
Sbjct: 1   MSRRRSTTSLDRAVVDVWQREVGGLPNRSFAHRLAASKDLVLQFDIYRKLEKHRGCVNTV 60

Query: 201 SFNADGDILVSGSDDRRVILWDW 269
           SFNADG+ILVSGSDDRR+ILWDW
Sbjct: 61  SFNADGEILVSGSDDRRIILWDW 83


>ref|XP_002306202.1| predicted protein [Populus trichocarpa] gi|222849166|gb|EEE86713.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/82 (60%), Positives = 57/82 (69%)
 Frame = +3

Query: 24  MKKRNRASVDTAVVDICRREVGHLSTRKFAHRLAASXXXXXXXXXXXXXXXHRGCVNTVS 203
           MKKR+ A +D AVV++ +RE+G LSTR FAHR AAS               H GCVNT+S
Sbjct: 1   MKKRSSADIDQAVVNVWKRELGQLSTRNFAHRFAASEDLVSRLEIHKKLEKHDGCVNTLS 60

Query: 204 FNADGDILVSGSDDRRVILWDW 269
           FNA GDILVSGSDD RVILWDW
Sbjct: 61  FNAGGDILVSGSDDLRVILWDW 82


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