BLASTX nr result

ID: Atractylodes21_contig00052121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052121
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   107   1e-24
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   102   2e-23
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    94   2e-21
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    90   4e-19
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    87   2e-18

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  107 bits (268), Expect(2) = 1e-24
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = -2

Query: 267 SLTTVQKLGIEITPTAEFGVYLGTGNAVQGKGECQSVVLHLQGIEIVESFLPLTLGNSDL 88
           SL TV++L I I+ +  FGV LGTG    G+GEC++V LHLQG+ ++E +LPLTLGNSDL
Sbjct: 445 SLDTVRRLQIPISSSRPFGVSLGTGAEAHGQGECKAVPLHLQGVCVMEDYLPLTLGNSDL 504

Query: 87  ILGIQWLEKLGAVTTNWKT 31
           ILG+QWLEKLG + TNWKT
Sbjct: 505 ILGVQWLEKLGTMVTNWKT 523



 Score = 30.0 bits (66), Expect(2) = 1e-24
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -1

Query: 310 EVVVMIDLGATHNFIS 263
           +V+VM+D GATHNFIS
Sbjct: 430 KVIVMVDPGATHNFIS 445


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  102 bits (254), Expect(2) = 2e-23
 Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = -2

Query: 267 SLTTVQKLGIEITPTAEFGVYLGTGNAVQGKGECQSVVLHLQG-IEIVESFLPLTLGNSD 91
           SL  + KLGI +T + EFGV LG G AV+G G C++V L+L G + +VE FLPL LGNSD
Sbjct: 508 SLKAIDKLGIPVTESEEFGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGLGNSD 567

Query: 90  LILGIQWLEKLGAVTTNWKT*LMTF*FNG 4
           +ILG+QWLE LG V +NWKT  M+F   G
Sbjct: 568 VILGVQWLETLGTVVSNWKTQKMSFQLGG 596



 Score = 31.6 bits (70), Expect(2) = 2e-23
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -1

Query: 310 EVVVMIDLGATHNFIS 263
           EVVVMID GATHNF+S
Sbjct: 493 EVVVMIDPGATHNFLS 508


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 94.0 bits (232), Expect(2) = 2e-21
 Identities = 43/84 (51%), Positives = 60/84 (71%)
 Frame = -2

Query: 267 SLTTVQKLGIEITPTAEFGVYLGTGNAVQGKGECQSVVLHLQGIEIVESFLPLTLGNSDL 88
           SL  V+++ I  T T ++GV +G+G AVQGKG C  VV+ L G+ +VE FLPL LG+ D+
Sbjct: 395 SLRLVEEMQIATTETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDM 454

Query: 87  ILGIQWLEKLGAVTTNWKT*LMTF 16
           +LG+QWL K GA+T +W+   MTF
Sbjct: 455 VLGMQWLPKQGAMTVDWRNLAMTF 478



 Score = 33.1 bits (74), Expect(2) = 2e-21
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 310 EVVVMIDLGATHNFIS 263
           EVVVMID GATHNFIS
Sbjct: 380 EVVVMIDCGATHNFIS 395


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 89.7 bits (221), Expect(2) = 4e-19
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = -2

Query: 267  SLTTVQKLGIEITPTAEFGVYLGTGNAVQGKGECQSVVLHLQGIEIVESFLPLTLGNSDL 88
            SL  VQ+L + +T T  +GV +GTG +V+GKG C+ V + +QG+ +VE FLPL LGN+D+
Sbjct: 1084 SLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDV 1143

Query: 87   ILGIQWLEKLGAVTTNWK 34
            ILG+ WL  LG V  NWK
Sbjct: 1144 ILGMPWLGTLGDVKVNWK 1161



 Score = 29.6 bits (65), Expect(2) = 4e-19
 Identities = 10/16 (62%), Positives = 15/16 (93%)
 Frame = -1

Query: 310  EVVVMIDLGATHNFIS 263
            EV++++D GATHNF+S
Sbjct: 1069 EVIILVDSGATHNFLS 1084


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 87.4 bits (215), Expect(2) = 2e-18
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = -2

Query: 267 SLTTVQKLGIEITPTAEFGVYLGTGNAVQGKGECQSVVLHLQGIEIVESFLPLTLGNSDL 88
           SL  VQ+L + +T T  + V +GTG +V+GKG C+ V + +QG+ +VE FLPL LGN+D+
Sbjct: 26  SLELVQQLALPLTTTTSYEVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDV 85

Query: 87  ILGIQWLEKLGAVTTNWK 34
           ILG+ WL  LG V  NWK
Sbjct: 86  ILGMPWLGTLGDVKVNWK 103



 Score = 29.6 bits (65), Expect(2) = 2e-18
 Identities = 10/16 (62%), Positives = 15/16 (93%)
 Frame = -1

Query: 310 EVVVMIDLGATHNFIS 263
           EV++++D GATHNF+S
Sbjct: 11  EVIILVDSGATHNFLS 26


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